Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.4e-146 523.1 294 100.0
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.5e-121 438.3 295 85.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.6e-110 403.3 303 74.6
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 5.2e-109 398.3 297 79.5
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.7e-108 394.8 297 78.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.1e-106 390.6 297 78.8
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 4.1e-90 335.5 295 65.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.7e-88 330.1 294 64.6
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 5.6e-87 325.1 299 63.9
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 3.1e-85 319.3 295 63.1
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.9e-83 312.0 249 73.9
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 8.3e-83 311.2 215 82.8
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 7.1e-82 308.1 292 61.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 3.5e-81 305.8 301 58.1
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.3e-80 303.9 284 60.2
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.7e-80 303.5 289 60.2
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.3e-80 303.1 215 81.4
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 5.1e-80 302.0 240 67.5
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 5.1e-80 302.0 299 58.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 6.6e-80 301.6 292 60.3
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 8.6e-80 301.2 295 60.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.5e-79 299.7 286 59.4
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.6e-79 298.5 289 58.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.2e-78 297.4 296 58.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.6e-78 297.0 258 62.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.8e-78 296.2 290 57.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.8e-78 296.2 294 56.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 6.2e-78 295.0 294 57.1
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.1e-77 294.3 259 61.8
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.1e-77 294.3 301 56.5
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.8e-77 293.5 258 62.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.3e-77 293.1 290 56.9
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.3e-77 293.1 261 59.8
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.1e-77 292.7 216 69.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 5.2e-77 292.0 260 61.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.6e-76 289.7 254 61.0
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 3.4e-76 289.3 284 57.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 9.9e-76 287.7 267 61.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.3e-75 287.3 260 60.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 2.2e-75 286.6 263 60.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.2e-75 286.6 257 59.5
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.1e-74 284.3 215 67.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.4e-74 283.9 256 60.2
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.4e-74 283.9 215 67.9
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.2e-73 280.8 270 60.0
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.2e-73 280.8 270 60.0
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 2.7e-73 279.6 238 62.6
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.0e-72 277.7 288 55.2
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.0e-72 276.2 265 58.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.0e-72 276.2 285 55.4
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 5.1e-72 275.4 296 52.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 6.6e-72 275.0 288 55.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.6e-72 275.0 236 62.3
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.6e-71 271.2 299 55.9
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 9.6e-71 271.2 285 55.4
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 3.6e-70 269.2 280 54.6
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.8e-69 266.9 260 57.7
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 3.1e-69 266.2 276 54.3
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 8.9e-69 264.6 217 65.9
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.6e-68 263.1 220 61.8
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.9e-67 259.6 338 48.2
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.8e-67 259.2 193 68.9
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.9e-67 258.8 217 65.0
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.9e-66 256.9 273 53.1
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.2e-66 255.8 252 55.2
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 6.0e-65 251.9 271 52.8
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 2.3e-64 250.0 266 52.6
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 5.1e-64 248.8 229 58.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 9.6e-63 244.6 246 57.7
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.3e-62 244.2 248 57.7
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 4.8e-62 242.3 231 59.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 8.1e-62 241.5 221 62.4
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.1e-61 241.1 220 58.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 5.3e-61 238.8 220 58.2
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 5.3e-61 238.8 201 64.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 6.9e-61 238.4 230 55.2
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.6e-60 236.5 207 59.4
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 8.4e-59 231.5 304 49.7
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.1e-58 231.1 304 49.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.1e-58 231.1 306 46.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.4e-58 229.9 196 62.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.2e-58 229.2 211 53.6
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 7.1e-58 228.4 226 56.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.7e-57 226.5 211 54.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 3.5e-57 226.1 343 45.5
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 7.9e-57 224.9 155 76.8
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 7.9e-57 224.9 202 55.0
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.0e-56 224.6 175 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.3e-56 224.2 208 55.3
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.3e-56 223.4 190 64.2
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 4.3e-55 219.2 251 50.6
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 7.4e-55 218.4 189 61.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.8e-54 215.7 388 41.8
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 8.1e-54 214.9 299 47.5
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.2e-50 203.0 148 69.6
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.2e-50 203.0 267 48.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.1e-49 200.3 293 46.4
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 9.6e-47 191.4 231 50.2
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 8.1e-46 188.3 196 55.1
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.0e-44 183.7 151 61.6
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.2e-43 180.3 189 57.1
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.5e-42 176.8 116 75.0
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.6e-41 174.1 201 50.7
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.7e-41 173.3 214 40.7
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.0e-40 169.9 196 52.6
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.5e-39 167.5 167 58.7
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 2.4e-37 160.2 190 53.2
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 6.9e-37 158.7 174 53.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.7e-35 154.1 193 47.7
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 3.6e-33 146.4 190 40.0
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.0e-32 143.3 143 51.0
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 7.7e-28 128.6 116 56.9
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.4e-26 124.4 133 51.1
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.5e-26 123.6 308 36.7
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 9.7e-23 111.7 178 36.5
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 5.3e-21 105.9 186 35.5
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 6.5e-19 99.0 80 61.2
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.9e-18 97.4 192 32.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.8e-14 83.6 90 54.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.1e-10 71.6 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 3.6e-09 66.6 86 51.2
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.7e-06 57.8 70 50.0


User provided reference genes

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