Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G312100 Theobroma cacao HOM05D000003 ORTHO05D000022 5.8e-109 397.5 193 100.0
Thecc.06G025800 Theobroma cacao HOM05D000003 ORTHO05D000022 4.0e-17 92.4 91 44.0
Thecc.10G094100 Theobroma cacao HOM05D000003 ORTHO05D000022 4.9e-15 85.5 91 40.7
Thecc.04G008500 Theobroma cacao HOM05D000088 ORTHO05D000830 3.0e-12 76.3 90 37.8
Thecc.04G185600 Theobroma cacao HOM05D004358 ORTHO05D004960 4.3e-11 72.4 92 38.0
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 5.6e-11 72.0 91 35.2
Thecc.09G291300 Theobroma cacao HOM05D000003 ORTHO05D011148 8.1e-10 68.2 78 44.9
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.8e-09 67.0 98 35.7
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-09 66.6 91 36.3
CARHR105380 Cardamine hirsuta HOM05D000003 ORTHO05D000022 4.0e-09 65.9 99 40.4
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 6.8e-09 65.1 117 33.3
Thecc.10G084500 Theobroma cacao HOM05D000003 ORTHO05D011148 8.9e-09 64.7 83 33.7
QL03p062046 Quercus lobata HOM05D000155 ORTHO05D000022 1.5e-08 63.9 95 38.9
CARHR111550 Cardamine hirsuta HOM05D000003 ORTHO05D000022 2.0e-08 63.5 96 33.3
AT5G42905 Arabidopsis thaliana HOM05D000003 ORTHO05D000022 9.9e-08 61.2 96 38.5
CARHR121910 Cardamine hirsuta HOM05D000155 ORTHO05D000022 2.9e-07 59.7 91 37.4
CARHR035340 Cardamine hirsuta HOM05D000003 ORTHO05D000022 3.7e-07 59.3 94 36.2
Thecc.03G089400 Theobroma cacao HOM05D000024 ORTHO05D000006 8.4e-07 58.2 81 34.6
CARHR181910 Cardamine hirsuta HOM05D000003 ORTHO05D000022 1.9e-06 57.0 95 32.6
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 2.4e-06 56.6 98 30.6


User provided reference genes

Program Settings