Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.6e-188 660.2 345 100.0
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 9.3e-158 560.5 348 85.3
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.8e-148 529.6 349 81.1
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.9e-148 528.5 349 81.1
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.5e-147 525.8 350 80.9
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 7.9e-117 424.5 269 82.2
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 3.7e-114 415.6 358 64.8
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.3e-111 407.1 331 64.0
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.4e-110 403.7 339 64.6
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.2e-109 400.6 334 64.7
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.6e-109 400.2 350 65.1
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 7.4e-107 391.3 342 61.7
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 4.8e-106 388.7 343 61.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 8.2e-106 387.9 344 61.9
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.7e-103 380.2 343 61.5
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.0e-103 378.6 372 59.4
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 8.8e-100 367.9 336 60.7
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.2e-99 367.5 360 58.6
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.5e-99 367.1 349 58.2
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.0e-99 366.7 351 60.7
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.0e-99 366.7 321 61.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 9.7e-99 364.4 345 60.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 7.0e-97 358.2 336 57.7
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 7.0e-97 358.2 339 59.3
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.0e-95 354.4 315 60.6
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.3e-95 354.0 344 57.6
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 5.0e-95 352.1 336 58.9
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 3.2e-94 349.4 345 57.1
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 5.5e-94 348.6 345 55.9
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 9.4e-94 347.8 352 55.4
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 2.1e-93 346.7 347 57.3
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.1e-93 345.1 339 57.8
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.8e-92 343.6 344 57.6
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 6.8e-92 341.7 330 55.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.2e-91 340.9 345 56.5
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 2.0e-91 340.1 346 55.2
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 3.4e-91 339.3 322 57.5
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 9.8e-91 337.8 319 58.3
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.7e-90 337.0 339 56.6
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.7e-90 337.0 331 57.1
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 2.2e-90 336.7 316 58.2
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 2.2e-90 336.7 337 59.1
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.8e-90 335.5 320 57.2
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.1e-89 334.3 345 55.7
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.1e-89 334.3 345 55.7
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.4e-89 334.0 349 55.3
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 3.1e-89 332.8 311 59.2
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 4.1e-89 332.4 357 56.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 5.4e-89 332.0 328 60.7
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 7.0e-89 331.6 325 57.5
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 9.1e-89 331.3 349 56.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.7e-88 329.7 340 57.1
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.5e-88 329.3 321 57.9
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 5.9e-88 328.6 438 46.6
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 7.7e-88 328.2 331 56.5
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 7.7e-88 328.2 321 57.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.0e-87 327.8 341 55.7
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.3e-87 327.4 351 54.1
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.7e-87 327.0 327 57.2
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.9e-87 326.2 323 57.0
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.8e-87 325.9 337 54.6
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 3.8e-87 325.9 339 56.0
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 5.0e-87 325.5 331 53.5
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 6.5e-87 325.1 342 53.2
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.1e-86 324.3 321 57.0
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.5e-86 323.9 326 56.7
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.9e-86 323.6 331 54.4
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 9.5e-86 321.2 321 57.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 9.5e-86 321.2 338 55.6
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.6e-85 320.5 322 54.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.1e-85 320.1 342 52.0
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.8e-84 317.0 342 55.0
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.2e-83 314.3 340 52.1
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.5e-83 313.9 327 55.7
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.4e-83 312.4 345 53.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 2.2e-82 310.1 351 53.8
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.0e-80 303.5 327 49.8
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 3.5e-80 302.8 332 52.7
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.3e-79 300.8 330 50.6
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.3e-79 300.8 356 50.3
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.8e-79 299.3 323 51.1
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 6.6e-79 298.5 315 52.7
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.1e-78 297.7 314 54.1
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-76 290.8 252 63.5
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 4.4e-75 285.8 338 50.6
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 4.4e-75 285.8 316 52.5
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.9e-74 283.1 376 47.1
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 7.0e-73 278.5 326 47.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 5.0e-71 272.3 344 50.0
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.1e-70 271.2 286 54.2
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.2e-69 265.4 330 49.4
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.6e-67 260.0 268 54.5
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.3e-62 243.0 400 39.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 4.4e-59 232.6 440 38.2
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.9e-54 217.2 230 54.8
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 4.0e-52 209.5 181 61.3
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 9.2e-49 198.4 364 35.4
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 4.9e-42 176.0 137 67.9
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.1e-41 174.9 357 33.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.7e-39 167.5 218 50.9
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 3.3e-38 163.3 284 40.1
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 3.4e-27 126.7 98 67.3
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.7e-26 124.4 133 52.6
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 4.9e-26 122.9 235 37.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.5e-25 119.4 80 73.8
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.3e-23 114.8 472 23.7
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.3e-18 98.2 119 48.7
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.1e-17 95.1 260 26.5
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.5e-17 94.0 187 40.1
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 2.7e-16 90.5 268 28.0
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.7e-16 90.5 200 27.5
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.8e-15 87.8 73 63.0
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 6.7e-15 85.9 76 65.8
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 6.7e-15 85.9 123 42.3
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 6.5e-10 69.3 43 72.1
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.4e-09 68.2 67 55.2
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.9e-09 67.8 67 53.7
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.2e-09 67.0 54 59.3
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.2e-08 65.1 59 55.9
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-06 58.5 79 46.8
Cre17.g713000 Chlamydomonas reinhardtii HOM05D006361 ORTHO05D141095 7.4e-06 55.8 200 25.0


User provided reference genes

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