Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G296800 Theobroma cacao HOM05D008403 ORTHO05D010317 4.7e-64 247.7 121 100.0
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 8.3e-21 104.0 92 65.2
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 5.0e-18 94.7 91 60.4
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 1.7e-13 79.7 77 55.8
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 8.3e-13 77.4 95 49.5
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 1.4e-12 76.6 84 52.4
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 1.9e-12 76.3 85 52.9
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 5.4e-12 74.7 94 47.9
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.2e-11 73.6 88 50.0
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 1.6e-11 73.2 84 52.4
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 1.6e-11 73.2 84 51.2
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 3.5e-11 72.0 67 59.7
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 4.6e-11 71.6 81 48.1
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 6.0e-11 71.2 94 45.7
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 3.0e-10 68.9 89 44.9
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 3.0e-10 68.9 92 41.3
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 3.0e-10 68.9 84 52.4
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 3.0e-10 68.9 78 50.0
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 5.1e-10 68.2 84 48.8
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 5.1e-10 68.2 76 52.6
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 6.6e-10 67.8 84 48.8
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 2.5e-09 65.9 58 58.6
Potri.016G001600 Populus trichocarpa HOM05D008403 ORTHO05D010317 5.6e-09 64.7 80 48.8
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 7.3e-09 64.3 49 65.3
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 7.3e-09 64.3 71 47.9
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 2.1e-08 62.8 89 43.8
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 2.8e-08 62.4 69 46.4
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 3.6e-08 62.0 90 41.1
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 8.1e-08 60.8 78 51.3
Lj6g0019770 Lotus japonicus HOM05D000001 ORTHO05D010775 8.1e-08 60.8 82 43.9
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 8.1e-08 60.8 87 43.7
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 2.3e-07 59.3 88 42.0
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 3.4e-06 55.5 71 40.8
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 3.4e-06 55.5 89 40.4
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 9.9e-06 53.9 92 44.6
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 9.9e-06 53.9 89 39.3
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 9.9e-06 53.9 89 39.3


User provided reference genes

Program Settings