Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 1.3e-80 303.1 174 100.0
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 1.0e-59 233.8 171 75.4
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.1e-47 193.7 162 66.0
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.7e-46 189.9 162 67.9
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 6.3e-46 188.0 162 63.0
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 7.2e-42 174.5 174 60.3
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 1.2e-41 173.7 174 63.8
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.6e-41 173.3 174 56.9
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 4.7e-41 171.8 182 57.7
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 1.0e-40 170.6 174 58.6
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 6.7e-40 167.9 164 54.3
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 8.8e-40 167.5 169 55.0
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 2.0e-39 166.4 174 58.6
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 9.7e-39 164.1 179 58.7
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.3e-38 163.7 165 56.4
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 1.3e-38 163.7 171 55.6
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.8e-38 162.5 98 77.6
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.1e-37 160.6 98 74.5
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 1.8e-37 159.8 96 77.1
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 1.8e-37 159.8 169 50.3
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.8e-37 159.8 95 81.1
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 1.8e-37 159.8 127 62.2
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.8e-37 159.8 171 53.8
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 2.4e-37 159.5 168 49.4
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 2.4e-37 159.5 167 56.9
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 5.3e-37 158.3 94 77.7
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 5.3e-37 158.3 181 56.9
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 5.3e-37 158.3 167 49.7
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 9.1e-37 157.5 98 75.5
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.2e-36 157.1 179 56.4
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.0e-36 156.4 180 56.1
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 2.7e-36 156.0 100 75.0
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 2.7e-36 156.0 156 51.9
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.5e-36 155.6 180 55.6
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.5e-36 155.6 180 53.9
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 1.3e-35 153.7 169 58.0
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.7e-35 153.3 172 51.7
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.2e-35 152.9 93 78.5
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.9e-35 152.5 97 72.2
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 3.8e-35 152.1 96 71.9
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 5.0e-35 151.8 161 52.2
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 5.0e-35 151.8 92 73.9
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 6.5e-35 151.4 172 53.5
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 2.5e-34 149.4 175 47.4
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 3.2e-34 149.1 175 51.4
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 2.1e-33 146.4 92 75.0
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.4e-32 143.7 175 49.7
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.8e-32 143.3 91 75.8
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 2.3e-32 142.9 98 70.4
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 4.0e-32 142.1 161 47.8
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.5e-31 140.2 92 72.8
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 2.6e-31 139.4 94 70.2
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 3.4e-31 139.0 134 55.2
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 4.4e-31 138.7 96 70.8
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 9.8e-31 137.5 168 46.4
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.3e-30 137.1 92 70.7
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 1.7e-30 136.7 96 62.5
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.2e-30 136.3 84 72.6
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 2.8e-30 136.0 171 43.9
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 3.7e-30 135.6 94 68.1
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 3.7e-30 135.6 87 71.3
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 4.8e-30 135.2 94 68.1
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 8.3e-30 134.4 95 65.3
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.8e-29 133.3 96 67.7
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.8e-29 133.3 87 71.3
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.8e-29 133.3 95 66.3
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 7.0e-29 131.3 98 61.2
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.2e-28 130.6 92 67.4
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 2.7e-28 129.4 154 48.1
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 2.7e-28 129.4 93 68.8
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 3.5e-28 129.0 154 48.1
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 3.5e-28 129.0 154 48.1
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 3.5e-28 129.0 81 75.3
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 4.5e-28 128.6 92 66.3
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 4.5e-28 128.6 92 66.3
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 5.9e-28 128.3 96 66.7
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 3.8e-27 125.6 96 61.5
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 3.8e-27 125.6 93 65.6
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 1.9e-26 123.2 71 81.7
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 2.5e-26 122.9 92 59.8
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 1.2e-25 120.6 96 55.2
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 6.1e-25 118.2 90 63.3
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 2.6e-23 112.8 96 53.1
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 2.7e-20 102.8 67 76.1
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.7e-19 100.1 87 51.7
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.9e-18 96.7 91 52.7
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 6.8e-16 88.2 92 46.7
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 4.9e-14 82.0 120 50.8
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.1e-09 66.6 89 40.4
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 3.6e-09 65.9 114 51.8
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.0e-09 64.7 112 52.7
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.0e-09 64.7 112 52.7
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.1e-08 64.3 41 75.6
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 1.1e-08 64.3 114 50.0
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.2e-07 60.8 120 52.5


User provided reference genes

Program Settings