Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G293800 Theobroma cacao HOM05D000082 ORTHO05D000038 1.3e-114 416.4 205 100.0
Thecc.02G293700 Theobroma cacao HOM05D000082 ORTHO05D000038 2.3e-63 246.1 193 67.9
Thecc.02G294000 Theobroma cacao HOM05D000082 ORTHO05D000038 1.6e-56 223.4 189 66.1
Thecc.02G319000 Theobroma cacao HOM05D000082 ORTHO05D000038 4.4e-46 188.7 183 54.6
Thecc.02G351600 Theobroma cacao HOM05D000082 ORTHO05D000038 2.2e-37 159.8 185 50.3
Thecc.02G351500 Theobroma cacao HOM05D000082 ORTHO05D000038 2.4e-36 156.4 193 44.6
Thecc.02G353000 Theobroma cacao HOM05D000082 ORTHO05D000038 5.3e-36 155.2 198 45.5
Thecc.02G351100 Theobroma cacao HOM05D000082 ORTHO05D000038 7.0e-36 154.8 196 44.4
Thecc.02G351200 Theobroma cacao HOM05D000082 ORTHO05D000038 1.0e-34 151.0 196 43.4
Thecc.07G132400 Theobroma cacao HOM05D000082 ORTHO05D000038 1.1e-33 147.5 204 44.1
Thecc.02G348200 Theobroma cacao HOM05D000082 ORTHO05D000038 1.9e-33 146.7 186 44.1
Thecc.02G352600 Theobroma cacao HOM05D000082 ORTHO05D000038 3.6e-32 142.5 169 49.1
Thecc.02G348000 Theobroma cacao HOM05D000082 ORTHO05D000038 6.1e-32 141.7 194 42.8
Gorai.008G182200 Gossypium raimondii HOM05D000082 ORTHO05D000038 2.6e-30 136.3 196 44.9
Gohir.D12G169600 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.5e-30 134.8 196 44.9
Thecc.02G348300 Theobroma cacao HOM05D000082 ORTHO05D000038 7.5e-30 134.8 170 46.5
Thecc.02G348400 Theobroma cacao HOM05D000082 ORTHO05D000038 1.7e-29 133.7 180 42.8
Thecc.02G351300 Theobroma cacao HOM05D000082 ORTHO05D000038 4.8e-29 132.1 170 47.1
Duzib268G1827 Durio zibethinus HOM05D000082 ORTHO05D000038 5.9e-27 125.2 190 43.2
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 2.5e-25 119.8 175 39.4
Gohir.A12G166150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.7e-22 108.6 170 41.8
Duzib268G0748 Durio zibethinus HOM05D000082 ORTHO05D000038 7.5e-22 108.2 107 55.1
Duzib251G0953 Durio zibethinus HOM05D000082 ORTHO05D000038 2.8e-21 106.3 105 55.2
Gohir.A08G045235 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.5e-17 94.0 172 33.7
Gohir.D08G047575 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.5e-17 94.0 174 35.1
Gorai.004G047000 Gossypium raimondii HOM05D000082 ORTHO05D000038 2.5e-17 93.2 174 35.1
Gorai.009G425900 Gossypium raimondii HOM05D000082 ORTHO05D000038 5.5e-17 92.0 183 33.9
Gohir.D08G051222 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.2e-17 91.7 190 34.7
Gohir.D08G051244 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.2e-17 91.7 190 34.7
Gohir.D08G051266 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.2e-17 91.7 190 34.7
Gohir.D08G051288 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.2e-17 91.7 190 34.7
Gohir.D08G051310 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.2e-17 91.7 190 34.7
Gohir.D05G366033 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.2e-16 90.9 162 35.2
Gorai.004G056300 Gossypium raimondii HOM05D000082 ORTHO05D000038 2.8e-16 89.7 172 33.7
Gohir.A08G037200 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.4e-15 87.4 174 33.9
Gorai.004G051200 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.8e-15 87.0 181 33.7
Gohir.A08G001150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.0e-15 85.9 158 34.8
Gohir.A08G041300 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.0e-15 85.9 181 33.1
Gohir.A08G037150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 6.8e-15 85.1 171 33.9
Gohir.A08G000121 Gossypium hirsutum HOM05D000082 ORTHO05D000038 8.8e-15 84.7 158 34.2
Gorai.004G046800 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.2e-14 84.3 162 36.4
Gohir.A08G037100 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.4e-14 82.8 176 33.0
Gohir.D05G366066 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.7e-14 82.0 168 32.7
Gohir.D07G205866 Gossypium hirsutum HOM05D000082 ORTHO05D000038 9.8e-14 81.3 140 35.0
Gorai.001G232000 Gossypium raimondii HOM05D000082 ORTHO05D000038 9.8e-14 81.3 140 35.0
Gorai.004G002900 Gossypium raimondii HOM05D000082 ORTHO05D000038 9.8e-14 81.3 158 33.5
COL.COLO4_22964 Corchorus olitorius HOM05D000082 ORTHO05D000038 1.3e-13 80.9 192 35.4
Gohir.D08G009750 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.3e-13 80.9 158 32.9
Gohir.A08G037000 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.8e-13 79.7 174 32.8
Gorai.001G232200 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.3e-13 78.2 140 33.6
Gohir.A07G199450 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.1e-12 77.8 140 33.6
COL.COLO4_16608 Corchorus olitorius HOM05D000082 ORTHO05D000038 2.0e-11 73.6 211 32.7
Gorai.013G082800 Gossypium raimondii HOM05D000082 ORTHO05D000038 3.5e-11 72.8 108 42.6
COL.COLO4_16606 Corchorus olitorius HOM05D000082 ORTHO05D000038 1.0e-10 71.2 182 30.2
Gohir.D13G072150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.7e-10 70.5 108 40.7
Gorai.013G085100 Gossypium raimondii HOM05D000082 ORTHO05D000038 2.3e-10 70.1 169 30.8
Gohir.D13G074500 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.0e-10 68.9 169 30.8
Gohir.D08G055540 Gossypium hirsutum HOM05D000082 ORTHO05D000038 8.6e-10 68.2 172 28.5
Gohir.D11G055901 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.6e-09 65.5 88 42.0
COL.COLO4_16607 Corchorus olitorius HOM05D000082 ORTHO05D009608 9.5e-09 64.7 189 30.2
Gohir.D08G047550 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.1e-08 63.5 171 28.7
QL03p065182 Quercus lobata HOM05D053392 ORTHO05D000038 3.6e-08 62.8 73 45.2
Gohir.D08G047525 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.7e-08 62.4 147 34.0
Gohir.D08G011866 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.4e-07 60.8 159 27.0
Gohir.D13G074601 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.4e-07 60.8 144 31.2
Gohir.A13G072233 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.3e-07 60.1 93 38.7
Gorai.013G085200 Gossypium raimondii HOM05D000082 ORTHO05D000038 3.0e-07 59.7 144 30.6
Gohir.A13G071833 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.0e-07 59.3 79 46.8
Gorai.007G061100 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.9e-07 58.2 81 42.0
Gorai.004G046900 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.2e-06 57.8 159 28.9
Gohir.D07G205833 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.6e-06 56.6 106 34.0


User provided reference genes

Program Settings