Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G280700 Theobroma cacao HOM05D007305 ORTHO05D009886 1.4e-37 159.1 76 100.0
Thecc.07G142000 Theobroma cacao HOM05D007305 ORTHO05D009886 1.1e-31 139.4 75 88.0
Thecc.04G308500 Theobroma cacao HOM05D007305 ORTHO05D009886 1.2e-30 136.0 75 85.3
Thecc.05G175600 Theobroma cacao HOM05D007305 ORTHO05D009886 4.1e-26 120.9 65 87.7
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 4.7e-22 107.5 63 74.6
CANSAT35G1669 Cannabis sativa HOM05D007305 ORTHO05D009886 8.9e-21 103.2 77 59.7
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 2.6e-20 101.7 63 71.4
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 3.4e-20 101.3 60 73.3
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 7.5e-20 100.1 63 71.4
Gohir.D05G352126 Gossypium hirsutum HOM05D007305 ORTHO05D009886 9.9e-20 99.8 68 63.2
Gorai.009G383800 Gossypium raimondii HOM05D007305 ORTHO05D009886 9.9e-20 99.8 68 63.2
Gohir.D03G068902 Gossypium hirsutum HOM05D007305 ORTHO05D009886 2.2e-19 98.6 60 70.0
Gohir.A04G032550 Gossypium hirsutum HOM05D007305 ORTHO05D009886 2.9e-19 98.2 68 61.8
Gorai.003G091400 Gossypium raimondii HOM05D007305 ORTHO05D009886 2.9e-19 98.2 60 68.3
Gorai.009G450700 Gossypium raimondii HOM05D007305 ORTHO05D009886 3.7e-19 97.8 60 70.0
Cc04_g16800 Coffea canephora HOM05D007305 ORTHO05D009886 4.9e-19 97.4 56 73.2
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 2.4e-18 95.1 76 57.9
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 9.2e-18 93.2 64 59.4
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 9.2e-18 93.2 64 59.4
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 9.2e-18 93.2 64 59.4
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 2.1e-17 92.0 64 59.4
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 2.7e-17 91.7 56 69.6
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 6.0e-17 90.5 64 57.8
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 1.3e-16 89.4 68 55.9
SHI14995 Sapria himalayana HOM05D007305 ORTHO05D009886 3.9e-16 87.8 67 55.2
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-16 87.4 68 50.0
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 6.6e-16 87.0 50 76.0
SHI27057 Sapria himalayana HOM05D007305 ORTHO05D009886 3.3e-15 84.7 69 52.2
Gohir.A05G322708 Gossypium hirsutum HOM05D007305 ORTHO05D009886 5.6e-15 84.0 69 47.8
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-15 83.6 69 50.7
SHI37667 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-14 82.0 69 49.3
SHI12340 Sapria himalayana HOM05D000002 ORTHO05D009886 1.4e-13 79.3 62 48.4
SHI17822 Sapria himalayana HOM05D000002 ORTHO05D009886 2.4e-13 78.6 59 52.5
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-13 77.0 68 45.6
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 1.1e-10 69.7 67 44.8
Cpa.g.sc74.28 Carica papaya HOM05D007305 ORTHO05D009886 5.4e-10 67.4 39 69.2
SHI03731 Sapria himalayana HOM05D007305 ORTHO05D009886 5.4e-10 67.4 61 44.3
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 4.7e-06 54.3 64 37.5


User provided reference genes

Program Settings