Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G249200 Theobroma cacao HOM05D012462 ORTHO05D013132 4.9e-82 307.8 156 100.0
Thecc.08G141800 Theobroma cacao HOM05D035442 ORTHO05D003357 1.8e-15 86.7 43 95.3
Thecc.07G118800 Theobroma cacao HOM05D000458 ORTHO05D000951 6.3e-13 78.2 59 67.8
Thecc.06G094200 Theobroma cacao HOM05D012462 ORTHO05D013132 1.3e-10 70.5 50 72.0
Thecc.10G145400 Theobroma cacao HOM05D012462 ORTHO05D013132 3.8e-10 68.9 40 82.5
Thecc.01G166800 Theobroma cacao HOM05D012462 ORTHO05D013132 1.1e-09 67.4 37 89.2
Thecc.01G204700 Theobroma cacao HOM05D012462 ORTHO05D013132 1.1e-09 67.4 37 89.2
Thecc.04G113500 Theobroma cacao HOM05D035442 ORTHO05D407784 1.9e-09 66.6 33 93.9
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 3.2e-09 65.9 45 75.6
Thecc.02G229800 Theobroma cacao HOM05D012462 ORTHO05D013132 4.2e-09 65.5 35 88.6
Thecc.02G257800 Theobroma cacao HOM05D012462 ORTHO05D013132 9.4e-09 64.3 37 83.8
Thecc.10G072300 Theobroma cacao HOM05D012462 ORTHO05D013132 9.4e-09 64.3 37 83.8
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 1.2e-08 63.9 45 73.3
Thecc.04G085300 Theobroma cacao HOM05D010356 ORTHO05D013132 1.6e-08 63.5 41 75.6
Thecc.09G085900 Theobroma cacao HOM05D012462 ORTHO05D013132 1.6e-08 63.5 37 83.8
Thecc.04G055700 Theobroma cacao HOM05D000045 ORTHO05D003357 2.1e-08 63.2 102 44.1
Thecc.10G120700 Theobroma cacao HOM05D012462 ORTHO05D013132 8.0e-08 61.2 37 81.1
Thecc.03G090100 Theobroma cacao HOM05D000715 ORTHO05D000024 1.4e-07 60.5 37 81.1
Thecc.01G241400 Theobroma cacao HOM05D012462 ORTHO05D013132 4.0e-07 58.9 37 81.1
Thecc.02G208900 Theobroma cacao HOM05D012462 ORTHO05D013132 4.0e-07 58.9 37 81.1
Thecc.05G113400 Theobroma cacao HOM05D012462 ORTHO05D013132 1.2e-06 57.4 42 69.0
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 1.5e-06 57.0 43 67.4
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 4.4e-06 55.5 49 59.2
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 7.5e-06 54.7 49 57.1
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 7.5e-06 54.7 49 57.1
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 9.7e-06 54.3 69 46.4


User provided reference genes

Program Settings