Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.6e-94 349.4 174 100.0
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 1.0e-56 223.8 171 74.9
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 1.2e-49 200.3 171 66.7
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 5.2e-48 194.9 170 65.9
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 5.2e-48 194.9 170 65.9
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 2.8e-38 162.5 164 59.1
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 2.8e-38 162.5 172 58.1
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.2e-36 157.1 163 55.8
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 2.0e-36 156.4 164 58.5
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 3.2e-34 149.1 174 52.9
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 6.1e-33 144.8 171 53.8
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.4e-32 143.7 174 51.1
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.3e-32 142.9 166 56.6
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 8.8e-32 141.0 151 55.6
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 2.0e-31 139.8 173 49.7
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 7.5e-31 137.9 166 53.6
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 1.1e-29 134.0 151 54.3
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 1.8e-29 133.3 165 50.9
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 4.1e-29 132.1 142 55.6
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 2.0e-28 129.8 142 54.9
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 3.5e-28 129.0 167 52.7
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 5.9e-28 128.3 173 46.8
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 7.7e-28 127.9 181 45.3
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 9.5e-26 120.9 172 42.4
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 8.0e-25 117.9 169 45.6
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 1.0e-24 117.5 175 44.6
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 8.9e-24 114.4 154 44.8
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 2.6e-23 112.8 170 45.9
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 3.4e-23 112.5 168 44.6
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 3.7e-22 109.0 173 42.2
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 4.9e-22 108.6 131 49.6
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 6.3e-22 108.2 158 45.6
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 8.3e-22 107.8 148 42.6
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 1.1e-21 107.5 170 43.5
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 1.1e-21 107.5 170 41.8
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.4e-21 105.1 175 40.0
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 7.0e-21 104.8 163 44.2
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 9.2e-21 104.4 137 43.8
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 2.7e-20 102.8 163 42.3
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 4.5e-20 102.1 131 45.0
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 1.0e-19 100.9 173 39.3
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 2.3e-19 99.8 176 40.3
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.3e-19 99.8 176 40.3
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 2.3e-19 99.8 167 41.3
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.6e-19 97.8 172 38.4
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.6e-19 97.8 177 37.9
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 1.5e-18 97.1 165 42.4
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 3.3e-18 95.9 167 40.7
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 5.6e-18 95.1 147 48.3
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 1.2e-17 94.0 166 39.2
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.8e-17 92.8 177 36.2
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 6.1e-17 91.7 158 43.0
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 8.0e-17 91.3 184 41.3
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 1.0e-16 90.9 186 34.9
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 1.0e-16 90.9 146 41.8
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 2.0e-15 86.7 166 39.2
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 2.6e-15 86.3 170 37.1
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.1e-13 80.9 177 37.9
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 2.4e-13 79.7 172 37.8
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 4.1e-13 79.0 167 37.7
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 4.1e-13 79.0 173 34.7
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 7.0e-13 78.2 169 35.5
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 7.0e-13 78.2 169 35.5
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 7.0e-13 78.2 169 35.5
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 7.0e-13 78.2 161 40.4
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 4.6e-12 75.5 168 32.1
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 2.3e-11 73.2 177 32.8
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 2.3e-11 73.2 171 32.7
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 5.0e-11 72.0 170 39.4
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 3.3e-10 69.3 169 35.5
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 4.3e-10 68.9 100 47.0
SalBow8G0258 Salvia bowleyana HOM05D065226 ORTHO05D009925 1.1e-08 64.3 156 35.9
SalBow8G1517 Salvia bowleyana HOM05D065226 ORTHO05D009925 1.1e-08 64.3 156 35.9
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 4.0e-08 62.4 74 50.0
Os01g0133200 Oryza sativa ssp. japonica HOM05D007903 ORTHO05D009925 4.0e-08 62.4 176 35.2
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 4.4e-07 58.9 151 30.5
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 7.5e-07 58.2 150 34.0


User provided reference genes

Program Settings