Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.1e-264 916.0 454 100.0
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 2.7e-242 841.6 452 91.8
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 4.2e-235 817.8 452 87.6
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 4.2e-235 817.8 452 87.8
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 5.5e-235 817.4 452 87.8
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 4.7e-226 787.7 452 86.5
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 3.4e-224 781.6 447 84.3
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.7e-220 769.2 431 86.1
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.7e-220 769.2 459 82.1
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 8.0e-218 760.4 448 83.0
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.0e-217 758.4 452 82.3
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 4.0e-217 758.1 450 82.2
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.2e-216 756.5 448 81.5
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.0e-216 755.7 453 81.7
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 2.6e-216 755.4 450 81.1
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 5.7e-216 754.2 455 80.9
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.1e-214 750.0 448 81.0
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 1.8e-214 749.2 447 81.0
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 1.8e-214 749.2 440 82.5
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 5.4e-214 747.7 448 82.8
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 7.0e-214 747.3 453 80.4
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 9.2e-214 746.9 453 81.2
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 2.0e-213 745.7 445 82.9
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 7.8e-213 743.8 446 81.8
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.7e-212 742.7 450 79.3
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.0e-212 741.9 454 79.5
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 8.6e-212 740.3 448 80.4
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.9e-211 739.2 451 80.3
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 7.3e-211 737.3 446 80.3
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 9.5e-211 736.9 416 85.3
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 9.5e-211 736.9 447 81.0
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.2e-210 736.5 450 77.8
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.6e-210 736.1 448 79.9
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 3.1e-209 731.9 452 79.0
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 8.9e-209 730.3 450 78.4
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-208 729.9 453 79.5
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 1.5e-208 729.6 452 77.9
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.5e-208 729.6 437 80.8
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.5e-208 729.6 450 76.0
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.6e-208 728.8 476 77.3
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 5.8e-208 727.6 449 77.7
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 7.5e-208 727.2 437 80.5
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.7e-207 726.1 432 80.6
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 1.4e-206 723.0 483 73.3
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.4e-206 722.2 456 77.6
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 9.2e-206 720.3 457 77.0
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.6e-205 719.5 453 76.4
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.6e-205 719.5 458 77.3
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 1.6e-205 719.5 443 77.2
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.0e-205 719.2 449 76.8
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.0e-204 716.8 440 78.2
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.7e-204 716.1 456 75.4
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 3.9e-204 714.9 450 77.3
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 3.9e-204 714.9 456 76.8
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.9e-203 712.6 458 75.8
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 1.9e-203 712.6 469 74.0
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 4.3e-203 711.4 430 80.0
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.6e-202 709.5 456 75.7
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 6.2e-202 707.6 448 78.3
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 3.1e-201 705.3 448 74.6
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 2.6e-200 702.2 448 74.1
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.3e-199 699.9 447 73.8
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 2.2e-199 699.1 453 76.2
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 8.3e-199 697.2 448 76.6
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.4e-198 696.4 448 75.4
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 3.2e-198 695.3 443 75.4
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 4.1e-198 694.9 453 76.2
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 4.1e-198 694.9 447 73.6
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 4.1e-198 694.9 448 73.4
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 9.2e-198 693.7 455 72.1
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 9.2e-198 693.7 448 73.2
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 4.6e-197 691.4 452 77.0
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.6e-197 691.4 447 74.5
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 7.8e-197 690.6 448 73.4
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.3e-196 689.9 448 73.4
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 3.0e-196 688.7 448 73.0
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 8.6e-196 687.2 467 70.4
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 1.9e-195 686.0 448 73.4
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 1.9e-195 686.0 453 71.1
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 3.3e-195 685.3 448 73.0
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.1e-193 680.2 459 71.2
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 3.1e-193 678.7 448 72.8
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 3.1e-193 678.7 468 70.1
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 6.8e-193 677.6 477 69.2
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.5e-192 676.4 457 70.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 3.4e-192 675.2 468 73.3
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 4.4e-192 674.9 499 69.7
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.3e-191 673.3 447 73.4
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 6.4e-191 671.0 430 74.9
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 3.5e-189 665.2 455 73.4
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.1e-187 660.2 484 68.2
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 4.3e-187 658.3 405 77.5
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 1.8e-185 652.9 429 72.3
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.2e-184 650.2 451 71.4
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 5.8e-184 647.9 406 78.3
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 5.4e-182 641.3 409 77.5
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.5e-179 633.3 451 71.8
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 3.4e-176 622.1 412 72.1
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.1e-174 617.1 464 67.7
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 3.2e-174 615.5 363 82.1
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 7.1e-174 614.4 387 73.9
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.0e-172 609.0 448 67.9
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 4.0e-169 598.6 464 64.4
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 1.0e-159 567.4 430 63.5
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 3.8e-159 565.5 426 63.6
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 7.9e-157 557.8 322 82.9
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 2.0e-152 543.1 430 59.1
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 4.5e-152 542.0 439 58.3
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 5.9e-152 541.6 426 61.5
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 4.2e-134 482.3 454 58.4
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 5.5e-134 481.9 276 81.2
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 6.7e-124 448.4 447 57.5
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.8e-116 423.7 439 46.5
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.3e-106 391.0 424 47.6
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 6.1e-101 372.1 315 62.5
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 3.0e-100 369.8 367 56.4
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.2e-91 341.3 493 40.2
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.3e-90 337.8 182 86.3
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 9.6e-62 241.9 337 43.9
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 2.1e-61 240.7 179 69.8
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 3.9e-55 219.9 108 90.7
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 6.7e-55 219.2 372 40.1
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 3.9e-47 193.4 124 80.6
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.8e-44 184.5 390 34.6
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 2.6e-43 180.6 124 74.2
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.9e-39 166.8 137 64.2
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 6.7e-31 139.4 85 69.4
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 8.2e-29 132.5 101 61.4
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 5.3e-28 129.8 127 52.0
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 1.9e-25 121.3 101 64.4
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 3.9e-23 113.6 83 66.3
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 5.1e-23 113.2 67 76.1
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 8.2e-21 105.9 77 66.2
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-20 104.8 104 58.7
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 2.4e-20 104.4 192 31.2
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 3.2e-17 94.0 67 65.7
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 5.5e-17 93.2 70 67.1
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 5.2e-15 86.7 56 78.6


User provided reference genes

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