Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 2.9e-113 412.1 247 100.0
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.2e-44 183.3 252 47.6
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.1e-41 172.2 246 44.7
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 3.6e-39 166.0 247 43.7
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 4.8e-39 165.6 246 44.7
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.4e-38 164.1 245 49.8
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 1.5e-37 160.6 259 42.9
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 5.8e-37 158.7 259 46.3
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 3.2e-35 152.9 246 41.9
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.0e-33 147.9 251 41.4
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.3e-33 146.7 278 46.4
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 3.9e-33 146.0 249 45.0
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 6.6e-33 145.2 266 50.0
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 9.6e-32 141.4 270 47.0
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.8e-31 139.8 251 42.6
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.1e-30 137.9 246 40.7
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 1.8e-30 137.1 239 39.7
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.1e-30 136.3 235 40.9
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 6.9e-30 135.2 243 37.0
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 9.0e-30 134.8 266 39.5
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.2e-28 130.2 240 40.4
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 8.4e-28 128.3 147 53.7
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 5.5e-27 125.6 251 35.5
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 5.5e-27 125.6 245 42.4
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 9.3e-27 124.8 233 39.9
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 9.3e-27 124.8 150 50.0
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.9e-25 119.4 239 39.3
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.9e-25 119.4 248 36.3
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 4.8e-23 112.5 251 37.5
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 1.4e-22 110.9 254 37.4
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 3.1e-22 109.8 245 38.4
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.6e-21 106.7 249 39.0
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.6e-21 105.1 246 35.4
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.0e-20 104.8 187 40.1
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.0e-20 104.8 256 35.2
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 2.9e-20 103.2 247 45.7
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 8.4e-20 101.7 242 36.8
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 8.4e-20 101.7 209 38.8
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.1e-19 101.3 248 35.1
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.6e-18 97.4 250 34.8
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 4.6e-18 95.9 247 35.6
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 7.9e-18 95.1 242 36.8
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 1.3e-17 94.4 245 35.9
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.8e-17 94.0 237 34.6
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 3.9e-17 92.8 245 33.1
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 8.7e-17 91.7 275 33.8
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.9e-16 90.5 236 32.2
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.9e-16 90.5 244 36.5
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 3.3e-16 89.7 260 31.9
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.6e-15 87.4 239 31.4
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 3.7e-15 86.3 233 32.2
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.1e-14 83.2 240 34.6
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 6.9e-14 82.0 242 33.1
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.9e-14 82.0 242 33.1
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.9e-14 82.0 242 33.1
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 1.2e-13 81.3 241 31.1
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.4e-13 79.7 237 32.9
PSO017G1627 Papaver somniferum HOM05D007269 ORTHO05D008531 4.5e-13 79.3 197 35.5
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 7.6e-13 78.6 252 31.0
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 1.3e-12 77.8 237 28.3
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 1.7e-12 77.4 232 33.6
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 1.7e-12 77.4 232 33.6
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 2.2e-12 77.0 248 33.1
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.9e-12 76.6 242 33.5
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.8e-12 76.3 242 34.3
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 8.4e-12 75.1 143 41.3
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 2.5e-11 73.6 246 29.7
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 3.2e-11 73.2 247 30.8
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 7.2e-11 72.0 244 27.9
Sabra01G0042900 Salix brachista HOM05D007269 ORTHO05D008531 7.2e-11 72.0 113 44.2
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 9.3e-11 71.6 243 28.8
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.2e-10 71.2 240 30.4
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.2e-10 71.2 246 29.3
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 2.7e-10 70.1 157 35.7
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 4.6e-10 69.3 229 29.7
Os01g0924200 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 1.0e-09 68.2 126 37.3
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 1.0e-09 68.2 127 37.0
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 1.8e-09 67.4 89 40.4
TWI18G0336 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.8e-09 67.4 157 34.4
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 2.3e-09 67.0 247 32.0
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 3.0e-09 66.6 152 33.6
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 3.9e-09 66.2 159 34.6
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 3.9e-09 66.2 240 32.1
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 3.9e-09 66.2 241 29.5
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 1.5e-08 64.3 241 30.3
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.9e-08 63.9 240 32.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.9e-08 63.9 248 29.4
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 2.5e-08 63.5 242 27.7
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.3e-07 61.2 240 31.7
MELO3C022330.2 Cucumis melo HOM05D026927 ORTHO05D008531 2.2e-07 60.5 240 29.6
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 3.7e-07 59.7 238 34.9
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 4.8e-07 59.3 200 30.5
Os12g0460100 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 8.2e-07 58.5 210 29.0
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 8.2e-07 58.5 96 36.5
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 1.1e-06 58.2 204 31.4
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.1e-06 58.2 95 34.7
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 2.4e-06 57.0 236 26.7
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 2.4e-06 57.0 96 35.4
Atru.chr11.2371 Acer truncatum HOM05D007269 ORTHO05D051934 3.1e-06 56.6 28 96.4
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 5.3e-06 55.8 177 47.5


User provided reference genes

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