Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.1e-267 926.0 462 100.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.5e-248 862.4 470 90.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.1e-243 846.3 461 88.7
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 2.5e-243 845.1 461 88.9
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 6.7e-228 793.9 462 84.4
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.3e-226 789.6 459 83.0
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 3.7e-226 788.1 461 83.7
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 5.3e-225 784.3 462 81.8
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 9.0e-225 783.5 462 84.2
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 1.5e-224 782.7 461 82.4
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.0e-224 782.3 462 82.7
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 3.4e-224 781.6 460 81.5
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 7.1e-222 773.9 461 80.9
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 2.1e-221 772.3 462 79.7
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 2.3e-220 768.8 461 82.0
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 5.7e-219 764.2 485 77.1
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 9.6e-219 763.5 461 77.9
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.8e-217 759.2 470 77.0
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 6.9e-217 757.3 461 80.5
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 9.0e-217 756.9 462 79.7
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.2e-216 756.5 461 79.4
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.6e-216 755.4 461 80.0
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 4.5e-216 754.6 462 76.4
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 5.8e-216 754.2 461 78.5
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.3e-215 753.1 461 79.0
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.9e-215 751.9 461 79.4
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.4e-214 749.6 462 79.2
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 4.2e-214 748.0 461 79.2
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.2e-213 746.5 462 77.9
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 2.1e-213 745.7 465 76.8
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.7e-213 745.3 461 77.4
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 2.7e-213 745.3 462 77.7
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 6.1e-213 744.2 499 73.1
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 7.9e-213 743.8 502 74.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 3.0e-212 741.9 461 78.3
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.9e-211 739.2 461 77.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.9e-211 739.2 461 77.2
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 5.7e-211 737.6 462 75.5
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.7e-211 737.6 491 74.3
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.8e-210 735.3 463 77.8
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.8e-210 735.3 461 76.4
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.8e-210 734.6 491 74.1
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 4.1e-209 731.5 461 76.4
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 9.0e-209 730.3 494 73.5
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.2e-208 729.9 461 76.6
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 2.2e-207 725.7 462 74.7
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 2.9e-207 725.3 544 68.4
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.4e-206 723.0 493 72.8
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 9.4e-206 720.3 461 75.5
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 7.9e-205 717.2 379 91.8
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 1.1e-203 713.4 462 74.9
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.3e-202 709.9 461 74.8
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 1.1e-198 696.8 466 72.7
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 3.0e-196 688.7 535 64.9
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.5e-195 686.4 496 66.7
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.2e-194 682.6 462 74.0
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.6e-192 676.4 402 81.6
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.0e-192 676.0 462 69.7
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.2e-186 656.0 393 81.7
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.4e-185 653.3 461 69.6
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.8e-185 652.9 457 71.1
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.1e-185 651.7 462 69.5
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 4.5e-184 648.3 399 77.4
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 4.5e-184 648.3 399 77.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 4.7e-181 638.3 397 75.8
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.4e-180 636.7 461 65.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 3.0e-180 635.6 460 66.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.5e-179 633.3 415 74.7
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 4.4e-179 631.7 459 64.7
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.5e-176 622.1 461 66.4
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.5e-171 606.7 462 66.9
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 3.4e-171 605.5 492 65.0
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.4e-171 605.5 375 76.5
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.4e-169 600.1 462 63.9
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 2.3e-167 592.8 461 65.3
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 3.3e-166 589.0 365 78.6
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 3.2e-161 572.4 321 85.0
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 8.6e-151 537.7 373 73.5
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 9.5e-150 534.3 333 77.2
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.4e-148 530.4 368 70.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 2.1e-120 436.8 268 77.6
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 7.1e-105 385.2 222 82.4
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 5.9e-75 285.8 168 81.5
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.8e-69 266.9 447 33.1
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 5.7e-62 242.7 146 80.1
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 8.0e-56 222.2 235 55.7
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.3e-53 214.9 159 70.4
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 4.6e-43 179.9 118 71.2
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 6.2e-32 142.9 426 27.7
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 6.8e-23 112.8 385 26.0
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 8.9e-23 112.5 76 67.1
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 3.0e-18 97.4 387 25.3
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.5e-17 95.1 351 24.8
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 5.2e-15 86.7 56 75.0
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 4.4e-14 83.6 477 22.9
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 1.3e-10 72.0 395 24.6
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 1.9e-09 68.2 355 24.5
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 5.8e-06 56.6 50 52.0
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 5.8e-06 56.6 55 54.5


User provided reference genes

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