Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G185800 Theobroma cacao HOM05D008876 ORTHO05D010747 3.9e-94 348.6 244 100.0
Duzib132G0209 Durio zibethinus HOM05D008876 ORTHO05D010747 2.7e-63 246.1 246 73.6
Duzib132G0342 Durio zibethinus HOM05D008876 ORTHO05D010747 2.7e-63 246.1 246 73.6
Gohir.A03G154600 Gossypium hirsutum HOM05D008876 ORTHO05D010747 8.0e-47 191.4 265 65.3
Gohir.D02G177500 Gossypium hirsutum HOM05D008876 ORTHO05D010747 4.8e-44 182.2 278 55.4
Gorai.005G199300 Gossypium raimondii HOM05D008876 ORTHO05D010747 7.0e-43 178.3 283 54.1
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 2.0e-42 176.8 267 58.4
QL08p040130 Quercus lobata HOM05D008876 ORTHO05D010747 6.4e-28 128.6 271 55.7
Manes.12G089700 Manihot esculenta HOM05D008876 ORTHO05D010747 3.9e-25 119.4 272 44.1
Ciclev10016096m.g Citrus clementina HOM05D008876 ORTHO05D010747 1.4e-22 110.9 308 44.2
Cfa014657 Carpinus fangiana HOM05D008876 ORTHO05D010747 3.7e-20 102.8 248 49.2
Lalb_Chr22g0356741 Lupinus albus HOM05D008876 ORTHO05D010747 1.2e-18 97.8 261 42.1
CiPaw.03G181200 Carya illinoinensis HOM05D008876 ORTHO05D010747 5.1e-17 92.4 275 47.3
Hma1.2p1_0002F.1_g002230 Hydrangea macrophylla HOM05D008876 ORTHO05D010747 1.5e-16 90.9 265 37.4
Potri.007G137001 Populus trichocarpa HOM05D008876 ORTHO05D010747 9.5e-16 88.2 77 62.3
Glyma.13G294400 Glycine max HOM05D008876 ORTHO05D010747 1.2e-15 87.8 305 38.4
Dinv01518 Davidia involucrata HOM05D008876 ORTHO05D010747 6.2e-15 85.5 267 36.3
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 1.4e-14 84.3 262 32.1
Dinv06861 Davidia involucrata HOM05D008876 ORTHO05D010747 1.2e-13 81.3 232 44.8
Sabra17G0012100 Salix brachista HOM05D008876 ORTHO05D010747 3.4e-13 79.7 97 51.5
Lj3g0013370 Lotus japonicus HOM05D008876 ORTHO05D010747 3.2e-11 73.2 273 39.6
Glyma.12G206500 Glycine max HOM05D008876 ORTHO05D010747 5.4e-11 72.4 306 42.5
Cpa.g.sc83.91 Carica papaya HOM05D008876 ORTHO05D010747 2.7e-10 70.1 74 51.4
Ca_01482_v3 Cicer arietinum L. HOM05D008876 ORTHO05D010747 3.5e-10 69.7 275 35.3
PGR042G1564 Punica granatum HOM05D008876 ORTHO05D010747 3.5e-10 69.7 307 32.2
MD09G1241900 Malus domestica HOM05D020475 ORTHO05D010747 6.0e-10 68.9 307 37.8
Prupe.3G134900 Prunus persica HOM05D020475 ORTHO05D010747 7.8e-10 68.6 308 39.9
Lj1P691T50 Lonicera japonica HOM05D008876 ORTHO05D010747 2.3e-09 67.0 73 56.2
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 3.9e-09 66.2 245 38.0
Oeu036079.1 Olea europaea HOM05D008876 ORTHO05D010747 6.6e-09 65.5 74 51.4
Actinidia11002 Actinidia chinensis HOM05D008876 ORTHO05D010747 8.6e-09 65.1 75 56.0
Potri.017G015700 Populus trichocarpa HOM05D008876 ORTHO05D010747 8.6e-09 65.1 379 36.4
TWI59G0664 Tripterygium wilfordii HOM05D008876 ORTHO05D010747 8.6e-09 65.1 243 34.6
Eucgr.A01856 Eucalyptus grandis HOM05D008876 ORTHO05D010747 1.5e-08 64.3 236 48.3
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.3e-08 63.2 272 33.5
Phvul.005G100800 Phaseolus vulgaris HOM05D008876 ORTHO05D010747 4.3e-08 62.8 347 36.3
A08p37220 Brassica napus HOM05D010571 ORTHO05D012729 9.5e-08 61.6 268 32.8
FvH4_6g26650 Fragaria vesca HOM05D020475 ORTHO05D010747 1.2e-07 61.2 73 52.1
FAN14G3778 Fragaria x ananassa HOM05D020475 ORTHO05D010747 1.2e-07 61.2 73 52.1
FAN09G4445 Fragaria x ananassa HOM05D020475 ORTHO05D022619 1.6e-07 60.8 73 52.1
Actinidia11106 Actinidia chinensis HOM05D008876 ORTHO05D010747 2.1e-07 60.5 63 55.6
Psat5g273640 Pisum sativum HOM05D008876 ORTHO05D010747 2.1e-07 60.5 284 40.8
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 2.1e-07 60.5 288 37.8
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.8e-07 60.1 274 40.5
BraA08t35620Z Brassica rapa HOM05D010571 ORTHO05D012729 3.6e-07 59.7 268 32.1
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 3.6e-07 59.7 294 28.2
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 3.6e-07 59.7 266 28.6
TPR.G6423 Trifolium pratense HOM05D008876 ORTHO05D010747 3.6e-07 59.7 294 41.2
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 3.6e-07 59.7 72 55.6
C08p00780 Brassica napus HOM05D010571 ORTHO05D012729 1.1e-06 58.2 264 31.4
BolC8t46876H Brassica oleracea HOM05D010571 ORTHO05D012729 1.1e-06 58.2 266 32.0
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.1e-06 58.2 251 35.5
Thhalv10008747m.g Eutrema salsugineum HOM05D010571 ORTHO05D012729 1.1e-06 58.2 256 36.3
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 4.0e-06 56.2 75 48.0
BcaC07g36944 Brassica carinata HOM05D010571 ORTHO05D012729 8.9e-06 55.1 264 28.8


User provided reference genes

Program Settings