Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 1.1e-84 316.6 161 100.0
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.7e-74 282.7 161 87.6
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 2.8e-72 275.4 159 88.7
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 7.6e-70 267.3 157 86.0
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 7.6e-70 267.3 157 86.0
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 4.1e-68 261.5 158 83.5
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 6.9e-63 244.2 150 80.7
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 2.6e-62 242.3 152 78.9
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 3.4e-62 241.9 158 77.2
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 3.4e-62 241.9 157 78.3
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 9.9e-62 240.4 158 76.6
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 9.9e-62 240.4 153 79.1
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 4.9e-61 238.0 158 75.9
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 4.9e-61 238.0 153 78.4
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.9e-60 236.1 152 75.7
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 4.2e-60 235.0 151 76.2
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 9.3e-60 233.8 158 74.1
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 9.3e-60 233.8 153 77.1
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 1.2e-59 233.4 152 77.0
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 1.2e-59 233.4 158 75.3
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 2.1e-59 232.6 158 75.3
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 2.1e-59 232.6 156 74.4
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 2.1e-59 232.6 152 77.0
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 4.6e-59 231.5 157 73.9
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 4.6e-59 231.5 151 74.8
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 7.8e-59 230.7 157 76.4
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 1.0e-58 230.3 158 74.7
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 1.0e-58 230.3 158 74.7
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 1.0e-58 230.3 155 74.2
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 1.7e-58 229.6 149 75.2
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.3e-58 229.2 153 74.5
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 3.0e-58 228.8 158 74.7
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.0e-58 228.8 155 72.9
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 3.9e-58 228.4 152 73.0
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 6.6e-58 227.6 154 74.7
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 6.6e-58 227.6 151 73.5
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.9e-57 226.1 151 73.5
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 2.5e-57 225.7 152 72.4
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 2.5e-57 225.7 155 72.3
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 3.3e-57 225.3 151 74.2
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 4.3e-57 224.9 152 74.3
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 4.3e-57 224.9 152 73.7
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 4.3e-57 224.9 151 74.2
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 4.3e-57 224.9 155 71.0
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 5.6e-57 224.6 161 72.0
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 5.6e-57 224.6 151 74.2
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 7.3e-57 224.2 152 72.4
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 9.6e-57 223.8 151 70.9
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 1.3e-56 223.4 153 73.9
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 1.3e-56 223.4 150 72.0
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.6e-56 223.0 151 72.2
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 2.1e-56 222.6 161 68.9
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 3.6e-56 221.9 158 67.7
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 4.8e-56 221.5 154 70.8
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 1.1e-55 220.3 151 67.5
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.4e-55 219.9 149 73.2
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 4.0e-55 218.4 157 71.3
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 5.3e-55 218.0 162 70.4
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 5.3e-55 218.0 162 70.4
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 9.0e-55 217.2 160 67.5
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.2e-54 216.9 158 69.6
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 1.2e-54 216.9 151 71.5
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.5e-54 216.5 174 64.4
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 2.0e-54 216.1 159 71.1
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 3.4e-54 215.3 155 65.8
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 3.4e-54 215.3 159 71.7
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 3.4e-54 215.3 151 68.9
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 3.8e-53 211.8 162 69.8
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 1.1e-52 210.3 158 64.6
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 1.9e-52 209.5 158 65.2
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 2.4e-52 209.1 153 69.9
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 5.4e-52 208.0 151 66.9
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 2.1e-51 206.1 142 73.9
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 2.1e-51 206.1 153 68.6
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 2.7e-51 205.7 151 64.9
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 6.0e-51 204.5 153 65.4
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 6.0e-51 204.5 151 66.2
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 7.9e-51 204.1 151 68.9
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 1.0e-50 203.8 153 68.0
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 1.0e-50 203.8 139 74.1
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 3.0e-50 202.2 153 68.6
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 6.7e-50 201.1 151 67.5
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 1.5e-49 199.9 153 63.4
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.9e-49 199.5 153 68.0
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.5e-49 199.1 158 64.6
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 3.3e-49 198.7 153 64.7
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 3.3e-49 198.7 158 64.6
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 1.3e-48 196.8 154 65.6
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 1.5e-46 189.9 161 58.4
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 1.5e-46 189.9 163 62.0
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 2.0e-46 189.5 153 64.1
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.9e-44 183.0 137 66.4
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 4.2e-44 181.8 177 57.1
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.1e-43 179.5 141 66.0
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 6.0e-43 177.9 153 60.1
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 1.3e-42 176.8 151 57.0
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 5.1e-42 174.9 151 57.0
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 3.8e-37 158.7 152 53.9
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 4.9e-37 158.3 97 79.4
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 2.5e-36 156.0 151 55.6
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 7.9e-35 151.0 93 76.3
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 1.1e-33 147.1 111 71.2
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 1.9e-33 146.4 109 71.6
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 4.8e-32 141.7 90 76.7
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 4.1e-31 138.7 153 48.4
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 7.2e-28 127.9 76 77.6
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.8e-24 115.9 77 76.6
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 8.2e-24 114.4 81 72.8
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 8.2e-24 114.4 81 72.8
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 1.0e-21 107.5 81 69.1
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 3.8e-21 105.5 114 55.3
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 1.1e-20 104.0 85 63.5
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.5e-17 93.6 66 71.2
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 2.6e-17 92.8 68 70.6
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 3.3e-17 92.4 121 44.6
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 2.3e-10 69.7 50 60.0
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 3.7e-08 62.4 88 42.0
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 3.1e-07 59.3 109 35.8


User provided reference genes

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