Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.1e-193 679.9 353 100.0
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 5.4e-161 571.2 353 84.1
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 4.5e-160 568.2 353 82.4
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.5e-158 563.1 353 83.0
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 1.9e-158 562.8 353 83.3
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.9e-127 458.8 349 71.3
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 3.2e-121 439.1 256 86.7
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.5e-118 430.3 355 63.9
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 4.3e-118 428.7 355 66.5
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 9.6e-118 427.6 355 66.5
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 2.1e-117 426.4 357 64.4
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 4.8e-117 425.2 341 65.7
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 1.4e-116 423.7 347 66.0
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 9.9e-115 417.5 354 64.1
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 8.4e-114 414.5 358 61.2
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.4e-113 413.7 352 64.8
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 3.2e-113 412.5 353 62.9
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 4.2e-113 412.1 337 66.8
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 3.0e-111 406.0 269 77.0
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 5.6e-110 401.7 354 61.0
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 5.6e-110 401.7 363 61.2
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.1e-108 396.0 344 64.8
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 5.3e-108 395.2 304 68.8
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 4.9e-106 388.7 353 59.2
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.9e-105 386.7 355 63.1
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.1e-104 383.3 354 59.3
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.7e-104 382.9 354 59.0
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 4.6e-104 382.1 354 58.5
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 4.6e-104 382.1 354 59.3
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.9e-104 381.3 280 68.6
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.0e-103 380.9 354 58.5
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.8e-103 380.2 328 63.1
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.1e-102 377.5 353 59.2
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 1.5e-102 377.1 279 70.3
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.5e-102 377.1 299 66.2
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.9e-102 376.7 352 58.8
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.5e-102 376.3 276 68.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 9.6e-102 374.4 320 63.4
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 1.1e-100 370.9 268 69.8
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.8e-100 370.2 360 58.1
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.0e-100 369.0 268 69.0
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 5.3e-100 368.6 276 68.5
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 6.9e-100 368.2 256 69.9
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 1.5e-99 367.1 268 68.7
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.6e-99 366.3 291 64.6
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.6e-99 366.3 360 57.5
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 2.6e-99 366.3 341 58.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 3.4e-99 365.9 268 68.7
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 3.4e-99 365.9 276 67.0
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.3e-98 364.0 273 67.8
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.3e-98 364.0 353 57.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.7e-98 363.6 355 57.7
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 4.9e-98 362.1 331 58.9
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 7.1e-97 358.2 351 57.5
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-96 357.5 353 56.4
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.0e-95 354.4 351 57.8
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 3.9e-95 352.4 268 66.4
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 8.2e-93 344.7 324 57.4
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 8.2e-93 344.7 340 57.1
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 1.8e-92 343.6 355 55.5
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 2.4e-92 343.2 356 55.9
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.4e-92 343.2 359 53.8
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 9.0e-92 341.3 335 56.1
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 9.0e-92 341.3 352 54.0
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-91 340.9 323 57.0
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 1.2e-91 340.9 352 56.5
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.5e-91 340.5 352 53.7
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 1.5e-91 340.5 357 53.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 5.0e-90 335.5 269 66.2
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 2.5e-89 333.2 297 57.2
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 3.2e-89 332.8 358 53.4
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 7.2e-89 331.6 354 54.2
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 9.3e-89 331.3 256 64.8
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 9.3e-89 331.3 308 57.5
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 9.3e-89 331.3 340 54.4
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 6.1e-88 328.6 274 63.5
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 7.9e-88 328.2 292 56.2
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.3e-87 327.4 294 57.5
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 3.0e-87 326.2 311 56.9
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.1e-87 325.5 301 56.5
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 6.7e-87 325.1 348 52.0
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.5e-86 323.9 311 56.3
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.3e-86 322.8 344 52.6
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 5.7e-86 322.0 268 62.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 5.7e-86 322.0 338 52.7
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 3.7e-85 319.3 368 50.5
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 3.7e-85 319.3 333 54.7
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 3.7e-85 319.3 267 61.4
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.1e-84 317.8 382 48.7
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.8e-84 317.0 332 52.1
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 6.9e-84 315.1 342 51.5
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 1.2e-83 314.3 352 52.3
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 3.8e-82 309.3 356 49.2
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.1e-81 307.8 283 54.8
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 3.2e-81 306.2 356 50.0
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 2.7e-80 303.1 355 50.4
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 2.3e-79 300.1 274 59.9
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 3.3e-78 296.2 310 51.3
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 3.1e-76 289.7 291 56.7
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 5.9e-75 285.4 235 62.1
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.1e-73 281.2 360 48.1
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.1e-72 276.9 232 61.2
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.1e-68 264.6 216 59.7
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 6.1e-56 222.2 230 51.3
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.1e-52 211.5 223 56.5
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 8.9e-47 191.8 162 61.7
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 3.4e-38 163.3 136 59.6
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.7e-27 127.1 331 30.2
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 6.2e-24 115.9 76 77.6
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 9.2e-20 102.1 285 28.1
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.6e-19 101.3 119 43.7
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 5.4e-12 76.3 79 53.2
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.6e-08 64.7 119 37.0
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 2.1e-08 64.3 311 26.0
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.4e-07 61.6 72 51.4
Mapoly0028s0045 Marchantia polymorpha HOM05D037891 ORTHO05D008297 1.2e-06 58.5 249 21.7
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 9.9e-06 55.5 93 41.9


User provided reference genes

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