Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.6e-253 879.0 466 100.0
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 2.7e-205 718.8 465 83.4
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 4.0e-204 714.9 470 82.8
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 7.2e-198 694.1 464 81.7
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 7.2e-198 694.1 468 80.3
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.6e-197 693.0 468 79.9
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.0e-196 690.3 468 79.5
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 7.1e-137 491.5 472 61.0
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 3.9e-135 485.7 470 61.1
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 4.3e-134 482.3 469 61.0
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.6e-133 480.3 474 62.4
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.4e-129 467.2 466 60.1
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 7.9e-128 461.5 470 59.1
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 5.1e-127 458.8 467 58.7
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 5.1e-127 458.8 473 57.5
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.5e-126 457.2 478 60.0
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 7.4e-126 454.9 473 59.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 1.5e-123 447.2 477 59.3
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.0e-122 444.5 474 58.9
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.1e-121 441.0 475 58.3
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.0e-119 434.5 485 56.5
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.0e-119 434.5 475 57.3
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 3.9e-119 432.6 470 59.6
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 2.6e-115 419.9 472 56.1
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.8e-109 399.8 481 55.3
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 6.3e-109 398.7 482 56.0
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 9.4e-105 384.8 485 53.4
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 9.4e-105 384.8 481 53.6
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 2.7e-104 383.3 483 50.5
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 4.7e-104 382.5 499 52.7
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 2.3e-103 380.2 499 50.7
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 3.0e-103 379.8 468 52.8
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-102 377.9 472 52.1
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.0e-102 377.1 460 53.0
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 1.3e-101 374.4 448 54.5
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 9.1e-100 368.2 494 49.6
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.6e-99 367.5 494 49.6
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 7.7e-99 365.2 462 53.2
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.0e-98 364.8 477 53.0
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 3.8e-98 362.8 464 51.3
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 3.8e-98 362.8 462 50.9
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.1e-97 361.3 498 49.6
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.1e-97 361.3 494 49.2
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.9e-97 360.5 489 51.9
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 3.2e-97 359.8 467 51.0
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 7.2e-97 358.6 479 52.8
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.7e-96 356.7 477 52.6
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 6.1e-96 355.5 487 49.3
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.0e-95 354.8 492 49.2
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 8.8e-95 351.7 484 47.5
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.7e-94 349.0 477 52.2
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 9.8e-94 348.2 477 52.2
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 2.8e-93 346.7 451 52.1
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.1e-92 344.7 497 48.1
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 4.1e-92 342.8 525 45.0
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 7.0e-92 342.0 425 50.8
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 3.5e-91 339.7 465 50.3
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 4.5e-91 339.3 496 48.0
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.7e-90 337.4 498 49.0
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 3.8e-90 336.3 495 46.9
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 2.1e-88 330.5 443 49.9
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 3.6e-88 329.7 467 51.0
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 5.2e-87 325.9 310 62.3
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 2.8e-85 320.1 477 47.4
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 3.7e-85 319.7 462 50.0
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.4e-84 317.8 472 47.7
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 2.4e-84 317.0 460 48.5
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.3e-82 311.2 475 47.4
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.7e-82 310.8 475 46.1
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 1.5e-81 307.8 460 47.0
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 1.5e-81 307.8 504 45.6
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 4.3e-81 306.2 478 46.7
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.4e-78 296.2 432 49.8
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.9e-77 293.5 481 44.7
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 6.4e-77 292.4 461 46.0
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.4e-76 291.2 461 45.8
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 4.6e-75 286.2 463 45.4
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 1.3e-74 284.6 478 43.5
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 6.6e-74 282.3 504 44.2
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 8.6e-74 282.0 349 53.3
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 9.5e-73 278.5 504 43.1
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 1.9e-68 264.2 487 43.5
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 7.3e-65 252.3 504 40.9
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 2.8e-64 250.4 472 42.2
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 8.1e-64 248.8 473 40.6
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 5.8e-62 242.7 538 38.7
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 5.4e-60 236.1 498 39.6
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 7.1e-60 235.7 473 41.2
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.1e-57 228.4 468 38.5
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.3e-53 214.9 482 39.4
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.0e-50 205.3 468 38.7
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 7.3e-49 199.1 483 38.7
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 1.8e-47 194.5 496 37.9
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 4.0e-47 193.4 371 41.0
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.2e-46 191.8 518 37.6
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 1.2e-46 191.8 520 37.1
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 9.3e-44 182.2 396 38.4
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 6.2e-40 169.5 462 37.2
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.1e-39 168.7 455 35.4
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 1.4e-39 168.3 343 38.2
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 4.4e-38 163.3 463 34.8
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 3.5e-35 153.7 460 34.3
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 9.6e-33 145.6 530 30.9
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 1.3e-32 145.2 489 34.4
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 6.2e-32 142.9 386 37.0
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 8.7e-26 122.5 502 29.9
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 7.4e-25 119.4 472 32.8
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 1.3e-24 118.6 384 35.9
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.5e-22 111.7 182 48.4
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 1.0e-21 109.0 165 46.1
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.7e-21 108.2 180 45.0
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.8e-18 98.2 365 32.1
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.9e-17 94.7 383 32.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 1.1e-15 89.0 155 41.3
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.1e-15 89.0 155 39.4
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.1e-15 89.0 164 42.7
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 1.2e-14 85.5 88 52.3
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 4.5e-14 83.6 155 40.6
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 1.3e-08 65.5 70 50.0


User provided reference genes

Program Settings