Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G163400 Theobroma cacao HOM05D014263 ORTHO05D015616 1.6e-135 486.1 245 100.0
Duzib248G1072 Durio zibethinus HOM05D014263 ORTHO05D015616 7.0e-67 258.1 253 60.1
Duzib132G0984 Durio zibethinus HOM05D014263 ORTHO05D015616 2.8e-47 193.0 133 75.2
Gohir.D12G139050 Gossypium hirsutum HOM05D014263 ORTHO05D015616 3.5e-42 176.0 162 62.3
Gohir.D13G063400 Gossypium hirsutum HOM05D014263 ORTHO05D015616 1.7e-36 157.1 209 46.9
TWI75G0328 Tripterygium wilfordii HOM05D001837 ORTHO05D000028 5.0e-33 145.6 179 46.9
QL08p034059 Quercus lobata HOM05D000042 ORTHO05D000028 3.3e-32 142.9 214 42.5
Gorai.013G071800 Gossypium raimondii HOM05D014263 ORTHO05D015616 2.9e-28 129.8 126 56.3
TWI36G0741 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 4.1e-27 125.9 180 43.3
Migut.H01211 Erythranthe guttata HOM05D001837 ORTHO05D000028 1.7e-25 120.6 145 46.2
CSS0024802 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 1.4e-22 110.9 176 40.3
Haze_12940 Corylus avellana HOM05D000042 ORTHO05D000028 1.8e-22 110.5 184 39.7
Ciclev10016818m.g Citrus clementina HOM05D014263 ORTHO05D015616 5.8e-21 105.5 183 37.7
Oeu058849.1 Olea europaea HOM05D000042 ORTHO05D000028 2.4e-19 100.1 181 34.8
Sabra07G0097400 Salix brachista HOM05D014263 ORTHO05D015616 1.2e-18 97.8 175 36.6
Actinidia24276 Actinidia chinensis HOM05D000042 ORTHO05D000028 6.0e-18 95.5 176 39.2
PGR142G0618 Punica granatum HOM05D004532 ORTHO05D015616 9.6e-16 88.2 116 39.7
Gohir.A03G163101 Gossypium hirsutum HOM05D000042 ORTHO05D000028 2.1e-15 87.0 67 68.7
Gohir.D02G186550 Gossypium hirsutum HOM05D000042 ORTHO05D015616 2.4e-14 83.6 67 67.2
Gorai.005G208800 Gossypium raimondii HOM05D000042 ORTHO05D015616 2.4e-14 83.6 67 67.2
Rhsim06G0156500 Rhododendron simsii HOM05D000042 ORTHO05D000028 3.5e-10 69.7 185 29.7
Sopen07g026340 Solanum pennellii HOM05D001837 ORTHO05D013283 1.7e-09 67.4 130 33.8
Solyc07g052700.3 Solanum lycopersicum HOM05D000042 ORTHO05D013283 3.9e-09 66.2 128 36.7
SGA_v2.0_scaffold49G18326 Striga asiatica HOM05D030099 ORTHO05D031640 3.9e-09 66.2 176 27.3
Sopen07g026330 Solanum pennellii HOM05D001837 ORTHO05D013283 5.1e-09 65.9 128 35.9
HPP92_019236 Vanilla planifolia HOM05D004532 ORTHO05D000028 5.1e-09 65.9 155 29.0
Peaxi162Scf00007g01333 Petunia axillaris HOM05D000042 ORTHO05D013283 8.7e-09 65.1 195 30.3
Potri.007G087500 Populus trichocarpa HOM05D004532 ORTHO05D000028 1.9e-08 63.9 131 30.5
PGR102G2915 Punica granatum HOM05D004532 ORTHO05D000028 3.3e-08 63.2 153 32.0
CANSAT01G2070 Cannabis sativa HOM05D004532 ORTHO05D000028 5.6e-08 62.4 128 34.4
MSTRG.14156 Avicennia marina HOM05D000042 ORTHO05D000028 7.3e-08 62.0 63 47.6
CiPaw.04G095700 Carya illinoinensis HOM05D004532 ORTHO05D000028 1.6e-07 60.8 120 34.2
arahy.Tifrunner.gnm1.ann1.XXIH72 Arachis hypogaea HOM05D004532 ORTHO05D000028 1.1e-06 58.2 127 27.6
Nn1g08850 Nelumbo nucifera HOM05D004532 ORTHO05D000028 1.1e-06 58.2 119 31.9
Aqoxy6G00549 Aquilegia oxysepala HOM05D004532 ORTHO05D000028 1.8e-06 57.4 123 30.1
Rhsim06G0156400 Rhododendron simsii HOM05D008818 ORTHO05D010237 2.4e-06 57.0 60 48.3
Manes.13G090200 Manihot esculenta HOM05D004532 ORTHO05D000028 3.1e-06 56.6 128 32.8
CsaV3_4G030750 Cucumis sativus L. HOM05D004532 ORTHO05D000028 5.3e-06 55.8 185 28.1
Sc03g0002290 Simmondsia chinensis HOM05D004532 ORTHO05D000028 5.3e-06 55.8 130 30.0
Thecc.01G107200 Theobroma cacao HOM05D004532 ORTHO05D000028 5.3e-06 55.8 128 31.2
PSO541G2101 Papaver somniferum HOM05D001837 ORTHO05D000028 6.9e-06 55.5 145 26.9


User provided reference genes

Program Settings