Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 4.3e-95 351.3 173 100.0
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.3e-79 298.5 161 90.7
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 6.0e-73 277.7 162 85.8
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.3e-72 276.6 162 85.2
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.1e-71 273.5 162 84.0
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 4.5e-68 261.5 139 88.5
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 2.3e-64 249.2 158 76.6
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 6.7e-64 247.7 167 73.7
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.1e-63 246.9 158 76.6
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 9.6e-63 243.8 157 76.4
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 8.1e-62 240.7 156 76.3
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.1e-61 240.4 158 74.1
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.4e-61 240.0 167 70.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.4e-61 240.0 152 78.3
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 3.1e-61 238.8 161 75.8
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 4.0e-61 238.4 156 75.6
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 4.0e-61 238.4 156 75.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 4.5e-60 235.0 160 71.2
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.0e-59 233.8 161 72.7
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.7e-59 233.0 157 71.3
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.7e-59 233.0 158 71.5
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 6.5e-59 231.1 159 73.6
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 8.4e-59 230.7 161 73.3
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 8.4e-59 230.7 175 66.9
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.1e-58 230.3 166 67.5
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 7.1e-58 227.6 140 77.9
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 9.3e-58 227.3 156 70.5
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.1e-57 226.1 159 69.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.5e-57 225.3 157 70.1
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 4.6e-57 224.9 149 69.8
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.0e-56 223.8 155 69.0
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.3e-56 223.4 150 71.3
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.8e-56 223.0 150 71.3
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 3.0e-56 222.2 157 70.1
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 3.9e-56 221.9 151 72.8
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.9e-56 221.9 158 66.5
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 5.1e-56 221.5 138 79.0
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 5.1e-56 221.5 157 69.4
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 6.7e-56 221.1 137 76.6
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 6.7e-56 221.1 163 64.4
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 8.7e-56 220.7 158 69.6
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 8.7e-56 220.7 159 66.7
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.9e-55 219.5 151 72.2
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.5e-55 219.2 169 66.3
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 4.3e-55 218.4 150 70.0
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 7.4e-55 217.6 149 68.5
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 9.6e-55 217.2 158 65.8
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 9.6e-55 217.2 189 61.4
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.3e-54 216.9 149 69.1
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 2.8e-54 215.7 149 67.8
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 2.8e-54 215.7 196 61.7
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.7e-54 215.3 150 70.7
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 4.8e-54 214.9 149 67.1
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 6.2e-54 214.5 172 64.5
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 8.2e-54 214.2 150 68.7
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.1e-53 213.8 149 68.5
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.4e-53 213.4 149 67.8
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.4e-53 213.4 196 61.2
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.4e-53 212.6 157 68.2
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 3.1e-53 212.2 158 69.6
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 5.3e-53 211.5 160 65.6
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.5e-52 209.9 149 66.4
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 3.4e-52 208.8 153 69.9
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 4.5e-52 208.4 174 61.5
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 7.6e-52 207.6 147 68.7
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.0e-51 207.2 208 55.3
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 2.9e-51 205.7 146 70.5
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 8.4e-51 204.1 166 62.7
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.4e-50 203.4 137 72.3
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 2.5e-50 202.6 158 63.3
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 4.2e-50 201.8 140 67.9
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 7.1e-50 201.1 149 70.5
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 9.3e-50 200.7 169 60.4
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 6.1e-49 198.0 175 60.0
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 7.9e-49 197.6 147 63.3
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.3e-48 196.8 170 59.4
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.8e-48 196.4 158 58.9
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 3.0e-48 195.7 161 62.7
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.5e-47 193.4 152 65.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.3e-46 190.3 141 67.4
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.8e-45 186.4 150 60.7
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.6e-44 182.6 139 66.2
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.2e-43 179.5 146 63.0
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.2e-34 149.1 109 62.4
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 9.4e-34 147.5 128 56.2
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 6.7e-32 141.4 163 46.6
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.3e-27 127.1 109 56.9
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.2e-27 126.3 112 60.7
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 6.5e-27 124.8 74 79.7
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-26 123.6 112 59.8
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 4.2e-26 122.1 147 44.9
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.2e-25 120.6 142 43.7
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.5e-20 102.1 95 55.8
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.6e-17 93.6 79 58.2
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 2.8e-14 82.8 104 39.4
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 2.4e-13 79.7 61 59.0
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 2.2e-11 73.2 64 56.2
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 7.2e-10 68.2 68 51.5


User provided reference genes

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