Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 1.2e-310 1068.9 535 100.0
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 4.1e-253 877.9 527 83.1
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.6e-217 759.6 526 71.3
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.8e-216 756.1 526 71.1
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 3.0e-216 755.4 525 71.4
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 8.6e-187 657.5 462 70.8
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 1.1e-184 650.6 499 66.3
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 6.9e-176 621.3 512 62.5
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 1.2e-175 620.5 454 67.8
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 3.4e-175 619.0 494 64.2
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 3.4e-175 619.0 479 64.1
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 7.6e-175 617.8 467 67.2
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.3e-174 617.1 477 63.9
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 1.7e-174 616.7 489 63.8
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 1.2e-172 610.5 494 64.6
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 2.1e-169 599.7 491 63.1
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 5.3e-168 595.1 487 60.4
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.2e-165 585.9 514 57.2
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 2.7e-164 582.8 460 62.8
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 7.9e-164 581.3 468 60.0
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 1.0e-163 580.9 471 60.3
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 5.1e-163 578.6 471 59.7
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 9.6e-162 574.3 471 59.4
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 6.2e-161 571.6 514 56.0
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 1.1e-157 560.8 407 66.3
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 7.1e-157 558.1 494 58.9
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.1e-156 556.6 504 57.3
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 3.7e-145 519.2 525 55.0
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 4.5e-135 485.7 508 52.4
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 1.8e-123 447.2 367 63.5
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 7.7e-111 405.2 493 44.4
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 6.1e-108 395.6 483 44.3
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 5.9e-103 379.0 304 62.8
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 6.5e-102 375.6 498 41.6
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 1.4e-99 367.9 258 69.8
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 5.9e-95 352.4 412 47.1
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 1.4e-88 331.3 427 43.3
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 6.0e-63 246.1 171 67.8
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 1.0e-62 245.4 179 67.6
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 8.7e-62 242.3 237 49.8
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 8.7e-62 242.3 237 49.8
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 3.3e-61 240.4 202 57.9
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 4.3e-61 240.0 226 57.5
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.1e-60 235.7 232 56.0
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 4.0e-59 233.4 320 46.2
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 6.9e-59 232.6 523 34.4
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.6e-54 216.1 182 61.5
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.8e-51 208.0 174 60.9
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.4e-51 207.6 178 60.1
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.6e-50 204.1 178 59.0
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.4e-49 199.1 170 60.0
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 7.1e-48 196.1 264 45.8
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.9e-45 188.0 179 55.9
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 9.6e-45 185.7 177 57.1
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.3e-44 185.3 163 58.9
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.6e-39 168.3 240 42.1
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.8e-38 164.9 172 51.7
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-36 158.3 138 58.0
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.0e-35 153.7 138 56.5
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.2e-34 152.1 121 62.0
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 6.0e-31 139.8 114 63.2
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 7.9e-31 139.4 113 62.8
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 7.7e-26 122.9 77 74.0
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 3.2e-24 117.5 356 30.6
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 2.7e-23 114.4 305 28.9
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 7.4e-21 106.3 217 32.3
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 1.7e-20 105.1 76 60.5
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.3e-19 100.1 128 46.1
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 5.0e-17 93.6 59 72.9
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 7.2e-16 89.7 168 36.3
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 4.4e-13 80.5 107 37.4
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 6.3e-12 76.6 111 43.2
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 3.5e-10 70.9 358 26.5
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 5.9e-10 70.1 113 34.5
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.3e-09 68.9 136 32.4
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.7e-09 68.6 76 39.5
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.9e-08 65.1 144 32.6


User provided reference genes

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