Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 7.9e-75 284.3 212 100.0
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 7.2e-52 208.0 185 74.6
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 8.2e-48 194.5 181 79.6
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 2.2e-45 186.4 185 77.8
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 2.9e-45 186.0 185 75.1
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 2.9e-45 186.0 186 77.4
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 5.3e-31 138.7 177 51.4
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 3.8e-29 132.5 180 49.4
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 5.0e-29 132.1 176 48.3
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 7.2e-28 128.3 178 46.6
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 6.1e-27 125.2 179 62.0
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 1.4e-26 124.0 182 49.5
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 2.0e-25 120.2 175 52.0
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 3.4e-25 119.4 166 55.4
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 7.5e-25 118.2 165 48.5
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 1.7e-24 117.1 165 47.9
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 2.8e-24 116.3 165 47.3
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 2.8e-24 116.3 165 47.3
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 3.7e-24 115.9 181 45.3
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 1.4e-23 114.0 179 46.9
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 3.1e-23 112.8 163 47.9
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 7.0e-23 111.7 182 42.3
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 9.1e-23 111.3 165 48.5
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 9.1e-23 111.3 165 46.1
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 2.7e-22 109.8 188 42.0
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 5.9e-22 108.6 168 42.9
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 1.0e-21 107.8 165 46.1
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 2.2e-21 106.7 165 45.5
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 2.9e-21 106.3 168 42.3
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 5.0e-21 105.5 172 52.9
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 5.0e-21 105.5 181 41.4
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 6.5e-21 105.1 171 45.0
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 5.5e-20 102.1 173 46.2
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 1.2e-19 100.9 185 41.1
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 1.6e-19 100.5 172 43.0
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 4.7e-19 99.0 174 51.1
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 1.0e-18 97.8 179 40.8
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 2.3e-18 96.7 150 49.3
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 1.5e-17 94.0 168 41.1
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 1.5e-17 94.0 177 42.4
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 2.6e-17 93.2 190 41.6
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 2.6e-17 93.2 178 39.9
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 4.4e-17 92.4 173 41.6
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 5.7e-17 92.0 189 38.1
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 9.8e-17 91.3 173 42.8
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 1.3e-16 90.9 166 41.6
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 1.3e-16 90.9 195 40.0
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 1.4e-15 87.4 179 39.1
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 7.0e-15 85.1 187 39.0
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 9.2e-15 84.7 175 34.3
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 3.5e-14 82.8 184 38.6
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 3.5e-14 82.8 180 36.7
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 7.7e-14 81.6 185 39.5
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 1.3e-13 80.9 171 39.8
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 1.7e-13 80.5 180 34.4
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 1.7e-13 80.5 179 36.3
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 1.7e-13 80.5 174 38.5
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 2.3e-13 80.1 183 38.8
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 3.8e-13 79.3 169 42.0
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 1.9e-12 77.0 154 36.4
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 2.1e-11 73.6 185 33.5
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 2.8e-11 73.2 173 39.9
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 4.7e-11 72.4 187 33.7
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 8.0e-11 71.6 180 33.9
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 1.8e-10 70.5 188 35.1
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 1.8e-10 70.5 197 34.5
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 4.0e-10 69.3 162 32.7
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 5.2e-10 68.9 171 37.4
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 8.9e-10 68.2 185 31.9
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.7e-08 63.9 161 33.5
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 8.3e-08 61.6 183 31.1
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.8e-07 60.5 161 32.3
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.2e-07 59.7 161 32.9
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 5.4e-07 58.9 154 33.8
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 5.4e-07 58.9 161 32.3
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 9.2e-07 58.2 175 31.4
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 1.6e-06 57.4 131 35.9


User provided reference genes

Program Settings