Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 5.8e-123 444.1 208 100.0
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 4.7e-96 354.8 211 82.9
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 3.7e-93 345.1 216 80.1
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 2.0e-91 339.3 207 80.2
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.1e-88 329.3 208 79.3
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.0e-88 327.4 208 79.3
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.8e-87 323.9 208 78.8
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.7e-85 319.7 210 77.1
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.8e-82 308.5 210 75.7
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.1e-81 307.0 210 75.2
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 4.7e-72 275.0 212 68.4
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 1.8e-71 273.1 215 67.0
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 4.0e-71 271.9 216 67.6
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 6.8e-71 271.2 215 66.5
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.0e-70 269.6 215 65.6
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.4e-70 268.9 212 67.0
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 3.4e-70 268.9 213 67.1
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 9.8e-70 267.3 215 65.6
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 3.1e-68 262.3 207 63.8
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.0e-67 259.6 188 67.0
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 4.5e-67 258.5 198 62.1
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 5.9e-67 258.1 235 57.9
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 7.7e-67 257.7 219 61.2
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.7e-67 257.7 216 62.0
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.3e-66 256.9 216 61.6
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 6.6e-66 254.6 198 63.1
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.1e-64 249.6 205 63.4
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.4e-63 246.9 207 61.8
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.8e-63 246.5 206 60.7
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.8e-63 246.5 198 62.1
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 2.3e-63 246.1 218 59.2
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 7.5e-62 241.1 211 59.7
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.8e-60 236.5 205 60.5
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 9.2e-60 234.2 210 60.0
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.2e-59 233.8 217 57.6
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 7.8e-59 231.1 200 57.0
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 7.8e-59 231.1 203 58.6
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 5.0e-58 228.4 216 55.1
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 1.6e-56 223.4 226 53.1
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 4.7e-56 221.9 216 56.0
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 6.1e-56 221.5 223 51.6
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 6.1e-56 221.5 179 61.5
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 8.9e-55 217.6 210 54.3
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 2.9e-53 212.6 214 50.9
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 5.4e-52 208.4 213 53.1
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.2e-51 207.2 209 54.1
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.0e-51 206.5 203 52.7
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 2.7e-51 206.1 204 54.4
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.8e-47 193.4 200 49.5
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 5.2e-47 191.8 193 52.3
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 8.3e-45 184.5 199 49.2
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.5e-43 179.1 203 51.2
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.0e-42 177.6 193 48.7
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 8.6e-42 174.5 204 47.1
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 1.4e-39 167.2 197 47.2
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 2.9e-37 159.5 127 61.4
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 4.9e-37 158.7 159 53.5
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 2.4e-36 156.4 228 42.5
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 1.7e-34 150.2 117 64.1
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 1.1e-33 147.5 181 48.1
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 2.6e-30 136.3 151 47.7
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 8.4e-29 131.3 164 43.9
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.4e-28 129.8 125 49.6
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 1.6e-27 127.1 172 45.3
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 3.9e-26 122.5 183 42.1
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.5e-25 120.6 185 38.4
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 2.1e-24 116.7 122 54.9
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 3.6e-24 115.9 112 53.6
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.8e-23 113.6 90 64.4
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 6.9e-23 111.7 234 32.5
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.3e-21 107.5 122 46.7
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.9e-21 106.3 104 55.8
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 5.4e-20 102.1 99 55.6
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 9.3e-20 101.3 119 48.7
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.0e-18 97.8 103 52.4
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.3e-18 96.7 102 52.9
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.9e-17 93.6 104 51.9
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.2e-14 84.3 106 47.2
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 2.9e-13 79.7 72 59.7


User provided reference genes

Program Settings