Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 5.3e-44 181.4 157 100.0
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.0e-39 165.6 155 94.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.0e-39 165.6 155 89.7
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.4e-36 156.0 156 62.8
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.6e-35 152.5 155 91.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.6e-35 152.5 155 91.0
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 4.5e-35 151.8 151 74.8
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 4.5e-35 151.8 155 60.0
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 2.2e-34 149.4 154 60.4
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 2.9e-34 149.1 155 68.4
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 3.8e-34 148.7 155 74.8
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 1.5e-33 146.7 156 57.7
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 3.2e-33 145.6 156 57.1
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 3.2e-33 145.6 155 82.6
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.2e-33 145.2 155 58.7
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 4.2e-33 145.2 154 57.8
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 5.5e-33 144.8 153 57.5
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 5.5e-33 144.8 155 59.4
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 7.2e-33 144.4 155 58.7
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 9.4e-33 144.1 151 58.9
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.2e-32 143.7 148 58.8
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.2e-32 143.7 148 58.8
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.2e-32 143.7 155 58.1
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.2e-32 143.7 155 58.1
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.6e-32 143.3 156 57.1
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.7e-32 142.5 177 71.2
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 3.6e-32 142.1 149 59.7
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 4.7e-32 141.7 151 57.6
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 6.1e-32 141.4 151 58.3
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.0e-32 141.0 151 58.3
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 2.3e-31 139.4 156 56.4
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.3e-31 139.4 158 56.3
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 2.3e-31 139.4 147 57.8
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.3e-31 139.4 152 57.2
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.0e-31 139.0 152 55.9
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 4.0e-31 138.7 155 55.5
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 5.2e-31 138.3 152 55.3
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 8.8e-31 137.5 152 55.3
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.2e-30 137.1 154 55.2
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.5e-30 136.7 150 56.7
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 1.5e-30 136.7 175 53.1
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 2.0e-30 136.3 150 56.0
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.0e-30 136.3 150 56.0
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 2.6e-30 136.0 150 55.3
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.6e-30 136.0 150 55.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 2.6e-30 136.0 150 55.3
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 2.6e-30 136.0 150 55.3
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 2.6e-30 136.0 150 55.3
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 3.3e-30 135.6 85 88.2
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 4.4e-30 135.2 150 55.3
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 4.4e-30 135.2 150 55.3
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 4.4e-30 135.2 150 55.3
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 4.4e-30 135.2 148 54.7
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 4.4e-30 135.2 153 54.9
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 5.7e-30 134.8 148 67.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 5.7e-30 134.8 152 54.6
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 7.5e-30 134.4 150 55.3
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 7.5e-30 134.4 152 57.2
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 9.7e-30 134.0 150 54.7
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 9.7e-30 134.0 148 54.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 9.7e-30 134.0 148 54.7
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.3e-29 133.7 149 56.4
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.7e-29 133.3 145 55.2
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.7e-29 133.3 153 57.5
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.7e-29 133.3 153 54.2
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.7e-29 133.3 153 54.2
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.7e-29 133.3 153 54.2
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 2.2e-29 132.9 85 87.1
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 2.2e-29 132.9 148 54.7
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 2.8e-29 132.5 152 53.3
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 3.7e-29 132.1 153 56.9
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 6.3e-29 131.3 153 52.9
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 6.3e-29 131.3 153 53.6
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 6.3e-29 131.3 155 53.5
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 8.2e-29 131.0 150 65.3
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.1e-28 130.6 148 56.8
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.4e-28 130.2 82 86.6
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 2.4e-28 129.4 144 54.9
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 2.4e-28 129.4 151 72.2
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.4e-28 129.4 152 67.8
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 3.1e-28 129.0 147 54.4
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 4.1e-28 128.6 149 53.7
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 5.3e-28 128.3 156 51.3
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 5.3e-28 128.3 147 55.1
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 7.0e-28 127.9 151 51.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 9.1e-28 127.5 151 51.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 9.1e-28 127.5 155 54.2
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 2.0e-27 126.3 149 51.7
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 2.0e-27 126.3 155 53.5
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 3.5e-27 125.6 150 52.7
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 4.5e-27 125.2 154 51.3
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 5.9e-27 124.8 148 52.7
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 7.7e-27 124.4 88 80.7
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.0e-26 124.0 140 52.9
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 8.5e-26 120.9 155 49.7
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.1e-25 120.6 149 67.1
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.9e-25 119.8 143 51.7
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.9e-25 119.8 143 51.7
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 1.6e-24 116.7 131 91.6
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.6e-24 116.7 151 49.7
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 2.1e-24 116.3 86 72.1
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 8.0e-24 114.4 135 53.3
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.0e-23 114.0 148 48.0
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 4.0e-23 112.1 151 47.0
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 5.2e-23 111.7 87 71.3
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 6.8e-23 111.3 144 48.6
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.0e-22 109.8 84 69.0
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 2.0e-22 109.8 140 45.7
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 9.8e-22 107.5 86 69.8
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.4e-20 103.6 79 67.1
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.1e-20 102.4 79 69.6
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.1e-20 102.1 79 68.4
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 9.1e-20 100.9 152 44.7
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.9e-18 95.9 144 40.3
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 2.1e-16 89.7 150 43.3
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 2.1e-16 89.7 115 51.3
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 5.2e-15 85.1 84 51.2
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 4.9e-13 78.6 152 39.5
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 8.3e-13 77.8 82 46.3
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.0e-11 73.2 46 80.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.7e-10 70.1 44 81.8
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 2.3e-10 69.7 54 66.7
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 2.8e-08 62.8 77 40.3
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 5.8e-06 55.1 59 44.1


User provided reference genes

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