Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 8.1e-191 670.2 335 100.0
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.2e-178 629.8 335 92.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.8e-173 610.9 335 89.0
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 7.6e-173 610.5 335 89.0
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.2e-172 609.0 335 89.0
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.9e-163 579.3 331 84.9
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 4.2e-163 578.2 331 84.6
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 1.9e-160 569.3 331 84.3
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 5.6e-160 567.8 332 83.4
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 3.6e-159 565.1 333 82.3
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.4e-158 563.1 331 83.4
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 4.0e-158 561.6 331 81.3
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 1.5e-157 559.7 331 81.9
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 2.6e-157 558.9 332 81.0
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 4.5e-157 558.1 327 81.0
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 7.6e-157 557.4 331 82.8
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 9.9e-157 557.0 332 82.2
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 1.3e-156 556.6 332 82.2
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.3e-156 556.6 329 81.5
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.3e-156 556.6 327 81.7
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.7e-156 556.2 327 81.3
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.9e-156 555.4 335 81.5
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 3.8e-156 555.1 325 82.5
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 3.8e-156 555.1 325 82.5
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 6.4e-156 554.3 327 83.2
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 6.4e-156 554.3 327 80.4
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 8.4e-156 553.9 327 82.3
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.4e-155 552.4 324 82.7
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 3.2e-155 552.0 327 80.4
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.2e-155 552.0 327 82.3
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 7.1e-155 550.8 330 80.0
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 9.3e-155 550.4 330 82.1
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.2e-154 550.1 327 81.3
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.2e-154 550.1 330 80.9
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 1.2e-154 550.1 327 81.0
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.7e-154 548.9 324 82.1
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 2.7e-154 548.9 327 80.7
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 2.7e-154 548.9 327 80.7
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.9e-154 547.4 324 81.8
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 7.9e-154 547.4 325 82.2
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 7.9e-154 547.4 325 82.2
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 7.9e-154 547.4 327 82.3
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 7.9e-154 547.4 325 82.2
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 2.3e-153 545.8 327 81.7
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 3.0e-153 545.4 325 81.5
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 3.0e-153 545.4 327 79.2
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 5.1e-153 544.7 327 80.1
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 6.7e-153 544.3 327 81.0
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 6.7e-153 544.3 325 81.8
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 6.7e-153 544.3 326 79.8
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.1e-152 543.5 327 80.4
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.5e-152 543.1 329 79.6
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 1.5e-152 543.1 331 79.8
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.3e-152 542.0 331 79.5
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 4.3e-152 541.6 327 80.4
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.6e-151 539.7 326 80.4
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 2.1e-151 539.3 329 77.8
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 2.1e-151 539.3 330 77.6
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 3.7e-151 538.5 327 78.6
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.8e-151 538.1 333 79.3
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 6.2e-151 537.7 331 78.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.1e-150 537.0 333 78.7
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.1e-150 537.0 326 77.3
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 1.8e-150 536.2 327 79.5
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.4e-150 535.8 342 77.5
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 2.4e-150 535.8 327 78.6
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.4e-150 535.8 335 78.8
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 3.1e-150 535.4 334 77.8
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.1e-150 535.4 330 78.2
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 4.0e-150 535.0 330 76.4
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 4.0e-150 535.0 330 79.1
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 6.9e-150 534.3 330 78.5
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 6.9e-150 534.3 330 80.3
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 1.2e-149 533.5 327 77.4
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.2e-149 533.5 325 78.8
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 1.7e-148 529.6 329 78.1
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 3.8e-148 528.5 331 78.5
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.1e-147 526.9 330 75.5
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.1e-147 526.9 324 80.2
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 2.5e-147 525.8 313 78.9
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 5.5e-147 524.6 326 77.0
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 4.6e-146 521.5 326 75.2
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 6.0e-146 521.2 400 67.8
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 6.0e-146 521.2 330 76.7
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.3e-145 520.0 327 75.8
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 5.7e-144 514.6 365 70.1
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 7.4e-144 514.2 365 70.1
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-143 513.5 332 75.0
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 2.1e-143 512.7 327 75.8
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 1.1e-142 510.4 345 73.0
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 9.0e-142 507.3 335 75.2
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 4.3e-136 488.4 317 75.1
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 5.9e-133 478.0 331 70.4
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 4.6e-130 468.4 327 70.6
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 2.5e-123 446.0 285 76.1
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.5e-117 425.6 342 66.4
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 5.9e-117 424.9 349 63.9
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.2e-116 422.9 330 64.2
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.6e-114 416.8 332 62.7
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.2e-113 411.8 286 73.1
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 2.2e-111 406.4 329 61.4
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 2.2e-108 396.4 270 69.6
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.4e-105 387.1 329 60.2
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 2.8e-103 379.4 328 57.6
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.8e-103 379.4 225 79.1
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.7e-103 379.0 329 59.0
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.7e-101 372.9 335 58.2
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.5e-99 366.3 223 78.5
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-99 365.2 337 55.2
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 7.2e-99 364.8 323 59.4
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-98 362.5 333 56.2
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 6.1e-98 361.7 331 55.6
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 8.0e-98 361.3 331 55.3
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 3.0e-97 359.4 329 57.1
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-96 357.1 331 54.4
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-96 357.1 334 55.7
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-94 350.5 330 55.5
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-93 347.4 331 53.5
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-93 345.5 331 53.5
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 2.9e-92 342.8 219 78.5
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 6.6e-92 341.7 329 53.8
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 9.5e-91 337.8 329 52.9
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-90 336.7 329 53.5
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.6e-90 335.9 329 54.1
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 1.5e-88 330.5 233 72.5
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-84 317.8 330 52.7
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-82 309.3 331 49.8
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-81 307.0 331 49.2
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.2e-80 304.3 326 48.8
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-73 280.4 264 54.5
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.2e-69 267.7 148 86.5
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-61 240.4 217 55.3
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 6.6e-60 235.3 150 74.7
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.1e-58 230.3 180 67.8
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 8.1e-58 228.4 140 77.1
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 3.8e-55 219.5 173 66.5
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 4.6e-53 212.6 214 56.1
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 2.4e-49 200.3 204 51.0
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 3.1e-49 199.9 178 54.5
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 4.0e-49 199.5 326 40.2
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-46 191.0 129 70.5
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 2.3e-44 183.7 136 69.1
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.3e-43 179.9 105 80.0
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 2.9e-39 166.8 158 55.1
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 6.0e-37 159.1 369 33.3
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.6e-29 134.4 330 31.2
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 5.1e-28 129.4 79 77.2
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 9.7e-27 125.2 292 32.2
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.6e-24 117.1 341 28.7
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.4e-24 116.7 318 28.6
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 7.6e-24 115.5 67 71.6
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-23 113.6 98 54.1
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.1e-19 101.7 61 85.2
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 3.7e-18 96.7 72 69.4
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 6.3e-18 95.9 363 27.0
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 3.1e-17 93.6 333 29.7
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.2e-15 87.4 60 75.0
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 9.4e-14 82.0 149 38.3
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.7e-13 79.7 45 77.8
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.0e-12 78.6 53 75.5
SGA_v2.0_scaffold72G24132 Striga asiatica HOM05D004164 ORTHO05D004891 6.7e-12 75.9 46 78.3
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 6.7e-12 75.9 94 47.9
SGA_v2.0_scaffold48G17919 Striga asiatica HOM05D004164 ORTHO05D004891 8.8e-12 75.5 47 78.7
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.6e-11 73.9 142 35.9
SGA_v2.0_scaffold47G17582 Striga asiatica HOM05D004164 ORTHO05D004891 4.4e-11 73.2 48 75.0
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 1.4e-09 68.2 94 40.4
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.2e-08 65.1 118 37.3


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