Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G131100 Theobroma cacao HOM05D044150 ORTHO05D010355 2.3e-21 105.9 125 100.0
Duzib132G0078 Durio zibethinus HOM05D044150 ORTHO05D010355 1.1e-07 60.5 33 93.9
Manes.10G100844 Manihot esculenta HOM05D010549 ORTHO05D010355 2.4e-07 59.3 44 68.2
Gorai.013G056400 Gossypium raimondii HOM05D007840 ORTHO05D010355 4.1e-07 58.5 37 81.1
Gohir.D13G050400 Gossypium hirsutum HOM05D007840 ORTHO05D010355 5.4e-07 58.2 38 78.9
Gohir.A13G051800 Gossypium hirsutum HOM05D007840 ORTHO05D010355 9.2e-07 57.4 38 78.9
Manes.10G100511 Manihot esculenta HOM05D010549 ORTHO05D010355 9.2e-07 57.4 44 65.9
Duzib248G0198 Durio zibethinus HOM05D007840 ORTHO05D186154 1.6e-06 56.6 125 69.6
Gohir.D13G051300 Gossypium hirsutum HOM05D007840 ORTHO05D047886 1.6e-06 56.6 41 73.2
Gohir.A13G051700 Gossypium hirsutum HOM05D007840 ORTHO05D022787 3.5e-06 55.5 41 70.7
Gohir.A13G067700 Gossypium hirsutum HOM05D007840 ORTHO05D010355 3.5e-06 55.5 41 73.2
Gohir.D13G054000 Gossypium hirsutum HOM05D007840 ORTHO05D010355 3.5e-06 55.5 41 73.2
Gorai.013G060800 Gossypium raimondii HOM05D007840 ORTHO05D010355 3.5e-06 55.5 41 73.2
COL.COLO4_17724 Corchorus olitorius HOM05D007840 ORTHO05D010355 4.6e-06 55.1 43 72.1
Gorai.008G017000 Gossypium raimondii HOM05D033232 ORTHO05D036173 7.8e-06 54.3 33 84.8


User provided reference genes

Program Settings