Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 4.4e-72 274.6 148 100.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 5.7e-56 221.1 148 82.4
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 9.1e-54 213.8 148 80.4
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 8.0e-50 200.7 148 77.0
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.4e-46 189.1 144 77.8
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 4.2e-43 178.3 148 69.6
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.2e-42 176.8 150 67.3
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 8.9e-41 170.6 147 66.7
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.5e-40 169.9 137 73.0
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-40 169.1 138 72.5
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.4e-40 168.7 148 64.2
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.3e-39 166.8 148 68.2
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 7.0e-38 161.0 149 65.1
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 1.6e-37 159.8 148 64.2
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 1.7e-36 156.4 148 64.2
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.7e-36 156.4 148 64.2
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 2.3e-36 156.0 148 64.2
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.9e-36 155.6 150 60.7
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 3.3e-35 152.1 149 61.1
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.6e-34 149.8 157 60.5
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 3.6e-34 148.7 150 59.3
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 8.0e-34 147.5 141 57.4
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.0e-33 145.6 141 56.7
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 3.0e-33 145.6 190 49.5
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 5.2e-33 144.8 150 61.3
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 4.4e-32 141.7 149 59.1
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 4.4e-32 141.7 148 58.1
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 7.5e-32 141.0 148 60.1
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 9.8e-32 140.6 135 62.2
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 1.7e-31 139.8 148 55.4
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 2.9e-31 139.0 139 61.9
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 2.9e-31 139.0 148 58.1
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 6.4e-31 137.9 148 53.4
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.1e-30 137.1 148 55.4
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 1.4e-30 136.7 148 53.4
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.4e-30 136.7 150 55.3
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 3.2e-30 135.6 153 56.9
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 3.2e-30 135.6 139 56.8
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 5.4e-30 134.8 148 53.4
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 9.2e-30 134.0 148 54.1
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 9.2e-30 134.0 148 54.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 9.2e-30 134.0 152 57.2
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.2e-29 133.7 87 80.5
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.6e-29 131.7 139 56.8
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 1.0e-28 130.6 144 56.2
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.3e-28 130.2 139 56.8
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 1.3e-28 130.2 142 54.9
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 6.6e-28 127.9 86 74.4
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.9e-27 126.3 140 58.6
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 4.7e-26 121.7 148 53.4
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 4.7e-26 121.7 139 51.8
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 6.2e-26 121.3 95 66.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 6.2e-26 121.3 148 53.4
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 6.2e-26 121.3 148 53.4
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 6.2e-26 121.3 148 53.4
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.1e-25 120.6 107 69.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 3.1e-25 119.0 148 52.0
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 6.8e-25 117.9 87 69.0
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 6.8e-25 117.9 102 65.7
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 8.9e-25 117.5 86 73.3
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.5e-24 116.7 86 73.3
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.5e-24 116.7 86 70.9
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 2.6e-24 115.9 105 65.7
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 3.4e-24 115.5 92 66.3
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 3.4e-24 115.5 86 73.3
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 3.4e-24 115.5 86 69.8
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 4.4e-24 115.2 150 52.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 4.4e-24 115.2 103 66.0
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.7e-23 113.2 80 72.5
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.7e-23 113.2 91 67.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.2e-23 112.8 103 61.2
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 2.9e-23 112.5 86 69.8
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 4.9e-23 111.7 73 76.7
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 6.4e-23 111.3 86 70.9
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 8.3e-23 110.9 91 65.9
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 4.1e-22 108.6 122 55.7
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 2.1e-21 106.3 177 44.6
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 3.5e-21 105.5 65 78.5
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 3.5e-21 105.5 106 55.7
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.3e-20 102.8 139 50.4
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 3.9e-20 102.1 88 63.6
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 8.6e-20 100.9 91 61.5
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 8.6e-20 100.9 91 61.5
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.5e-19 100.1 86 61.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 5.6e-19 98.2 114 56.1
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 7.3e-19 97.8 69 73.9
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 6.2e-18 94.7 61 78.7
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 6.8e-17 91.3 115 49.6
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.0e-16 89.7 77 62.3
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 3.4e-16 89.0 60 76.7
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 5.8e-16 88.2 104 56.7
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.2e-15 86.3 64 71.9
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 8.3e-15 84.3 100 54.0
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.1e-13 79.7 59 71.2
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 2.3e-12 76.3 101 46.5
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 7.3e-11 71.2 74 50.0
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 6.8e-09 64.7 108 43.5
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.5e-08 63.5 76 50.0
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 4.9e-07 58.5 114 37.7


User provided reference genes

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