Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.0e-246 856.3 429 100.0
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.3e-217 759.6 423 89.6
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 9.3e-216 753.4 427 87.4
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.0e-214 750.0 427 87.1
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.3e-214 748.8 425 87.3
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 6.4e-209 730.7 429 86.5
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 3.3e-181 638.6 422 74.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.8e-179 632.9 429 75.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 4.1e-179 631.7 430 75.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.0e-177 627.1 426 73.0
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 8.5e-177 624.0 403 76.2
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.9e-176 622.9 420 72.4
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 5.1e-174 614.8 433 71.4
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.5e-173 613.2 429 70.9
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 3.7e-172 608.6 391 75.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 9.1e-171 604.0 387 75.7
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.4e-168 596.7 397 74.6
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 4.2e-168 595.1 427 69.1
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 7.2e-168 594.3 394 73.4
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.2e-167 593.6 389 75.3
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 6.1e-167 591.3 397 73.6
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.0e-166 590.5 404 73.3
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.3e-166 589.3 434 68.0
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 5.2e-166 588.2 427 68.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 6.7e-166 587.8 431 69.4
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.5e-165 586.6 427 70.5
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 3.3e-165 585.5 394 72.3
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 4.4e-165 585.1 401 72.1
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 4.4e-165 585.1 397 70.8
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 4.4e-165 585.1 393 73.8
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.7e-164 583.2 417 67.1
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 3.7e-164 582.0 428 68.7
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 6.3e-164 581.3 421 67.5
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.4e-163 580.1 416 67.8
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 5.3e-163 578.2 414 67.9
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 9.1e-163 577.4 416 67.5
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.6e-162 576.6 363 75.5
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.5e-162 575.1 376 72.3
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 7.7e-162 574.3 394 69.3
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.3e-161 573.5 417 67.1
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.3e-161 573.5 416 66.8
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.3e-161 573.5 362 74.3
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.3e-161 573.5 393 71.2
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.3e-161 573.5 394 69.0
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 5.0e-161 571.6 417 66.9
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.5e-161 571.2 415 67.0
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 6.5e-161 571.2 425 66.8
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 7.2e-160 567.8 367 72.5
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.2e-159 567.0 432 65.5
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.6e-159 566.6 371 73.0
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.1e-159 566.2 421 65.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.1e-159 566.2 363 72.7
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.8e-158 563.1 375 70.9
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.5e-157 560.1 408 66.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 9.7e-157 557.4 361 72.3
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 2.8e-156 555.8 428 63.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 6.3e-156 554.7 411 68.6
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.1e-155 553.9 395 68.1
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 5.3e-155 551.6 347 72.9
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 9.1e-155 550.8 369 70.2
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 2.2e-153 546.2 421 64.1
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 3.8e-153 545.4 344 74.7
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.1e-151 539.7 351 72.9
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.0e-150 537.3 418 63.9
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.3e-150 536.2 379 67.0
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 4.0e-150 535.4 390 66.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.0e-150 535.4 412 67.0
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.8e-148 529.3 375 71.2
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 6.3e-148 528.1 428 61.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.3e-148 528.1 390 68.7
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 7.0e-147 524.6 349 73.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.2e-146 523.9 429 63.2
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.7e-146 522.7 366 68.3
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.9e-144 516.5 431 60.3
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 7.2e-144 514.6 364 66.8
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 9.5e-144 514.2 420 62.4
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.6e-143 513.5 375 68.3
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 5.7e-141 505.0 417 60.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.8e-140 502.7 507 53.5
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.6e-137 491.5 378 65.6
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.8e-133 477.6 372 62.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 4.3e-128 462.2 295 75.6
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.1e-123 447.6 363 56.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.5e-122 442.6 433 55.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 4.6e-122 442.2 326 62.9
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.7e-116 423.7 387 55.8
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 5.8e-109 398.7 358 52.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.3e-108 397.5 347 54.2
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.2e-108 396.7 375 57.3
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 4.6e-106 389.0 368 55.7
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 4.8e-103 379.0 287 64.8
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 4.8e-103 379.0 286 64.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-100 369.4 347 51.6
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.2e-92 343.6 314 57.3
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.7e-84 317.4 331 51.4
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.2e-71 273.9 358 46.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.3e-65 253.8 375 39.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 4.1e-54 216.5 132 74.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-52 211.8 129 75.2
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 4.7e-42 176.4 133 66.9
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.3e-41 174.1 185 52.4
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 9.8e-40 168.7 108 73.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.9e-27 127.9 199 42.7
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 2.5e-27 127.5 112 54.5
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.6e-26 124.8 125 52.8
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.5e-24 118.2 376 28.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.4e-24 116.7 79 63.3
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.3e-23 115.2 168 39.3
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 7.3e-19 99.4 75 61.3
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.6e-18 98.2 77 62.3
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 2.8e-18 97.4 122 45.9
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.8e-17 94.7 77 61.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 4.4e-16 90.1 342 27.2
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.7e-15 88.2 224 31.2
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 8.3e-15 85.9 303 27.1
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.4e-14 84.3 52 76.9
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 4.1e-14 83.6 179 32.4
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.6e-13 81.6 303 27.4
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 1.7e-12 78.2 57 66.7
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 5.4e-06 56.6 32 68.8


User provided reference genes

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