Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G110500 Theobroma cacao HOM05D002634 ORTHO05D002558 2.3e-81 305.4 150 100.0
Duzib052G0908 Durio zibethinus HOM05D002655 ORTHO05D002558 2.1e-61 239.2 139 82.7
COL.COLO4_32575 Corchorus olitorius HOM05D002655 ORTHO05D002558 7.6e-56 220.7 144 79.2
Duzib248G0667 Durio zibethinus HOM05D002655 ORTHO05D002558 2.4e-54 215.7 140 75.7
Sabra09G0072400 Salix brachista HOM05D002655 ORTHO05D002558 2.7e-53 212.2 140 72.1
Potri.009G094100 Populus trichocarpa HOM05D002655 ORTHO05D002558 1.7e-52 209.5 140 72.9
QL11p032810 Quercus lobata HOM05D002655 ORTHO05D002558 3.3e-51 205.3 140 69.3
TAR376G0230 Trochodendron aralioides HOM05D002634 ORTHO05D003100 5.6e-51 204.5 139 68.3
Hma1.2p1_1023F.1_g249020 Hydrangea macrophylla HOM05D002655 ORTHO05D002558 2.1e-50 202.6 140 68.6
Ciclev10028186m.g Citrus clementina HOM05D002655 ORTHO05D002558 4.7e-50 201.4 140 68.6
Dinv42202 Davidia involucrata HOM05D002655 ORTHO05D002558 1.1e-49 200.3 140 67.9
Phvul.007G041300 Phaseolus vulgaris HOM05D002655 ORTHO05D002558 1.1e-49 200.3 139 68.3
Gohir.D02G206848 Gossypium hirsutum HOM05D002655 ORTHO05D002558 1.4e-49 199.9 142 70.4
FvH4_2g07860 Fragaria vesca HOM05D002655 ORTHO05D002558 3.1e-49 198.7 140 66.4
RcHm_v2.0_Chr6g0262281 Rosa chinensis HOM05D002655 ORTHO05D002558 4.0e-49 198.4 141 68.1
Gorai.005G234500 Gossypium raimondii HOM05D002655 ORTHO05D002558 5.2e-49 198.0 141 70.2
FAN24G1942 Fragaria x ananassa HOM05D002655 ORTHO05D002558 9.0e-49 197.2 140 66.4
Nn5g30443 Nelumbo nucifera HOM05D002655 ORTHO05D002558 9.0e-49 197.2 140 65.7
Atru.chr5.2469 Acer truncatum HOM05D002655 ORTHO05D002558 1.5e-48 196.4 142 64.8
Glyma.20G130300 Glycine max HOM05D002655 ORTHO05D002558 1.5e-48 196.4 140 68.6
VMungo0720G1495 Vigna mungo HOM05D002655 ORTHO05D002558 1.5e-48 196.4 139 66.9
Gohir.A03G185600 Gossypium hirsutum HOM05D002655 ORTHO05D002558 2.0e-48 196.1 142 69.0
Manes.17G116700 Manihot esculenta HOM05D002655 ORTHO05D002558 3.4e-48 195.3 140 68.6
Lalb_Chr06g0165401 Lupinus albus HOM05D002655 ORTHO05D002558 3.8e-47 191.8 139 67.6
FAN20G1018 Fragaria x ananassa HOM05D002655 ORTHO05D002558 1.1e-46 190.3 140 62.1
Prupe.8G137000 Prunus persica HOM05D002655 ORTHO05D002558 1.9e-46 189.5 141 63.8
TWI31G0106 Tripterygium wilfordii HOM05D002655 ORTHO05D002558 1.9e-46 189.5 140 65.0
arahy.Tifrunner.gnm1.ann1.U2UZ8D Arachis hypogaea HOM05D002655 ORTHO05D002558 3.2e-46 188.7 139 64.7
CSS0017818 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 3.2e-46 188.7 140 62.1
CSS0016508 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 7.1e-46 187.6 140 60.7
FAN27G2566 Fragaria x ananassa HOM05D002655 ORTHO05D002558 7.1e-46 187.6 140 62.1
Lj5g0017746 Lotus japonicus HOM05D002655 ORTHO05D002558 7.1e-46 187.6 141 65.2
Ca_11062_v3 Cicer arietinum L. HOM05D002655 ORTHO05D002558 1.2e-45 186.8 140 64.3
FAN15G0283 Fragaria x ananassa HOM05D002634 ORTHO05D002558 1.6e-45 186.4 140 61.4
Cfa004602 Carpinus fangiana HOM05D002655 ORTHO05D002558 2.1e-45 186.0 142 66.9
Glyma.10G261000 Glycine max HOM05D002655 ORTHO05D002558 4.6e-45 184.9 141 65.2
Psat6g217240 Pisum sativum HOM05D002655 ORTHO05D002558 4.6e-45 184.9 140 66.4
Haze_10198 Corylus avellana HOM05D002655 ORTHO05D002558 1.0e-44 183.7 141 64.5
TPR.G19088 Trifolium pratense HOM05D002655 ORTHO05D002558 5.1e-44 181.4 142 64.8
Aqoxy5G01133 Aquilegia oxysepala HOM05D002655 ORTHO05D002558 1.1e-43 180.3 142 63.4
SalBow6G2177 Salvia bowleyana HOM05D002634 ORTHO05D002558 7.3e-43 177.6 139 61.9
Medtr1g107165 Medicago truncatula HOM05D002655 ORTHO05D002558 2.1e-42 176.0 142 64.8
CANSAT25G3644 Cannabis sativa HOM05D002655 ORTHO05D002558 3.6e-42 175.3 141 62.4
Oeu044271.1 Olea europaea HOM05D002655 ORTHO05D002558 4.8e-42 174.9 141 59.6
Oeu044272.1 Olea europaea HOM05D002655 ORTHO05D002558 4.8e-42 174.9 141 59.6
Cpa.g.sc106.111 Carica papaya HOM05D002655 ORTHO05D002558 1.4e-41 173.3 142 60.6
CiPaw.05G013000 Carya illinoinensis HOM05D002655 ORTHO05D002558 3.1e-41 172.2 140 62.1
Rhsim11G0158300 Rhododendron simsii HOM05D002655 ORTHO05D002558 5.3e-41 171.4 139 55.4
Eucgr.G01325 Eucalyptus grandis HOM05D002655 ORTHO05D002558 9.0e-41 170.6 142 57.7
Eucgr.L00953 Eucalyptus grandis HOM05D002655 ORTHO05D002558 9.0e-41 170.6 142 57.7
MSTRG.20192 Avicennia marina HOM05D002655 ORTHO05D002558 1.7e-39 166.4 141 58.2
Sed0006288 Sechium edule HOM05D002655 ORTHO05D002558 2.2e-39 166.0 139 58.3
Cc02_g19370 Coffea canephora HOM05D002655 ORTHO05D002558 5.4e-38 161.4 143 57.3
Migut.B00397 Erythranthe guttata HOM05D002655 ORTHO05D002558 1.2e-37 160.2 150 57.3
Nitab4.5_0001480g0110 Nicotiana tabacum HOM05D002655 ORTHO05D002558 1.2e-37 160.2 143 58.0
Nitab4.5_0014669g0010 Nicotiana tabacum HOM05D002655 ORTHO05D002558 2.7e-37 159.1 143 57.3
PSO210G1174 Papaver somniferum HOM05D002655 ORTHO05D002558 5.1e-36 154.8 140 55.0
ClCG05G010340 Citrullus lanatus HOM05D002655 ORTHO05D002558 6.7e-36 154.5 139 54.0
Thhalv10022642m.g Eutrema salsugineum HOM05D002655 ORTHO05D002558 8.7e-36 154.1 140 56.4
CsaV3_3G018150 Cucumis sativus L. HOM05D002655 ORTHO05D002558 1.1e-35 153.7 139 54.0
Oeu037259.2 Olea europaea HOM05D002655 ORTHO05D002558 1.1e-35 153.7 141 54.6
PGSC0003DMG400025860 Solanum tuberosum HOM05D002655 ORTHO05D002558 1.1e-35 153.7 145 53.8
Peaxi162Scf00016g02435 Petunia axillaris HOM05D002655 ORTHO05D002558 3.3e-35 152.1 147 54.4
CAN.G606.17 Capsicum annuum HOM05D002655 ORTHO05D002558 4.3e-35 151.8 147 52.4
AT2G15020 Arabidopsis thaliana HOM05D002655 ORTHO05D002558 5.6e-35 151.4 140 55.0
AL3G46830 Arabidopsis lyrata HOM05D002655 ORTHO05D002558 1.6e-34 149.8 140 55.0
Lsat_1_v5_gn_9_112601 Lactuca sativa HOM05D002655 ORTHO05D002558 3.7e-34 148.7 144 55.6
PSO170G1869 Papaver somniferum HOM05D002655 ORTHO05D002558 6.2e-34 147.9 141 53.9
A03p45370 Brassica napus HOM05D002655 ORTHO05D002558 1.1e-33 147.1 140 54.3
BraA03t13669Z Brassica rapa HOM05D002655 ORTHO05D002558 1.1e-33 147.1 140 54.3
HanXRQChr03g0068761 Helianthus annuus HOM05D002655 ORTHO05D002558 1.1e-33 147.1 143 55.2
BcaC01g03073 Brassica carinata HOM05D002655 ORTHO05D002558 1.4e-33 146.7 140 54.3
C03p56290 Brassica napus HOM05D002655 ORTHO05D002558 1.4e-33 146.7 140 54.3
BolC3t17919H Brassica oleracea HOM05D002655 ORTHO05D002558 1.4e-33 146.7 140 54.3
MELO3C019552.2 Cucumis melo HOM05D002655 ORTHO05D002558 2.4e-33 146.0 140 53.6
Sopen01g049700 Solanum pennellii HOM05D002655 ORTHO05D002558 2.4e-33 146.0 145 51.7
Sp3g28430 Schrenkiella parvula HOM05D002655 ORTHO05D002558 5.3e-33 144.8 140 54.3
BcaB08g34579 Brassica carinata HOM05D002655 ORTHO05D002558 1.2e-32 143.7 140 52.9
AUR62039061 Chenopodium quinoa HOM05D002655 ORTHO05D002558 2.6e-32 142.5 144 52.8
ECA240G1815 Erigeron canadensis HOM05D003511 ORTHO05D004403 2.6e-32 142.5 146 52.7
AUR62010327 Chenopodium quinoa HOM05D002655 ORTHO05D002558 4.5e-32 141.7 143 51.0
CARHR105450 Cardamine hirsuta HOM05D002655 ORTHO05D002558 7.6e-32 141.0 139 52.5
DCAR_001654 Daucus carota HOM05D002655 ORTHO05D002558 9.9e-32 140.6 150 48.7
PGR042G3535 Punica granatum HOM05D002655 ORTHO05D002558 3.8e-31 138.7 143 51.7
THA.LOC104819551 Tarenaya hassleriana HOM05D002655 ORTHO05D002558 4.9e-31 138.3 142 52.8
Aa31LG8G13010 Aethionema arabicum HOM05D002655 ORTHO05D002558 5.5e-30 134.8 139 50.4
Carub.0003s2896 Capsella rubella HOM05D002655 ORTHO05D002558 1.6e-29 133.3 143 52.4
Ah.08g217500 Amaranthus hybridus HOM05D002655 ORTHO05D002558 1.3e-28 130.2 141 47.5
MBI16_g02801_MAGBIO Magnolia biondii HOM05D002655 ORTHO05D002558 3.9e-28 128.6 140 50.7
SGA_v2.0_scaffold519G52675 Striga asiatica HOM05D002655 ORTHO05D002558 3.7e-26 122.1 141 48.9
Sc08g0001340 Simmondsia chinensis HOM05D002655 ORTHO05D002558 5.8e-24 114.8 139 42.4
ATR0041G012 Amborella trichopoda HOM05D002655 ORTHO05D002558 5.3e-17 91.7 109 46.8
unitig_46.g18496 Utricularia gibba HOM05D002655 ORTHO05D002558 1.0e-15 87.4 140 40.0
SEGI_04032 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 3.8e-07 58.9 117 33.3


User provided reference genes

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