Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G108600 Theobroma cacao HOM05D011891 ORTHO05D014146 5.4e-83 310.8 146 100.0
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 1.9e-19 99.8 125 43.2
MBI07_g06919_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 6.7e-17 91.3 127 40.2
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 5.7e-16 88.2 106 45.3
MBI07_g29092_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 1.3e-15 87.0 116 42.2
MELO3C031770.2 Cucumis melo HOM05D011891 ORTHO05D014146 1.2e-13 80.5 153 35.9
MBI07_g02631_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 1.2e-13 80.5 115 39.1
Zm00001eb279500 Zea mays HOM05D031261 ORTHO05D010602 1.6e-10 70.1 128 36.7
ATR0787G152 Amborella trichopoda HOM05D015573 ORTHO05D010602 1.2e-08 63.9 101 39.6
MBI17_g19033_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.5e-08 63.5 129 36.4
SGA_v2.0_scaffold66G22474 Striga asiatica HOM05D011891 ORTHO05D010602 2.8e-07 59.3 80 40.0
CSS0015059 Camellia sinensis var. sinensis HOM05D031598 ORTHO05D014146 4.8e-07 58.5 64 43.8
MBI02_g27281_MAGBIO Magnolia biondii HOM05D000027 ORTHO05D000066 6.3e-07 58.2 111 36.0
SGA_v2.0_scaffold96G28940 Striga asiatica HOM05D015573 ORTHO05D017203 6.3e-07 58.2 56 42.9
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 1.1e-06 57.4 113 31.9
MBI14_g08068_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 1.1e-06 57.4 137 31.4
MBI13_g04188_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 1.4e-06 57.0 62 41.9
Zm00001eb244580 Zea mays HOM05D011587 ORTHO05D010602 2.4e-06 56.2 114 36.8
SGA_v2.0_scaffold127G34043 Striga asiatica HOM05D011891 ORTHO05D014146 3.1e-06 55.8 124 36.3
CiPaw.05G034500 Carya illinoinensis HOM05D011587 ORTHO05D010602 4.1e-06 55.5 99 39.4
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 4.1e-06 55.5 53 45.3
Os06g0343500 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 5.3e-06 55.1 93 31.2
MBI05_g34728_MAGBIO Magnolia biondii HOM05D011587 ORTHO05D010602 9.1e-06 54.3 113 35.4


User provided reference genes

Program Settings