Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.3e-68 263.1 144 100.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.2e-61 240.0 142 90.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 9.8e-61 236.9 144 91.0
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.4e-51 205.7 146 80.1
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 7.0e-51 204.1 146 79.5
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 9.2e-51 203.8 144 77.8
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.2e-50 203.4 146 79.5
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 5.6e-48 194.5 143 77.6
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.3e-46 189.1 144 71.5
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 2.3e-46 189.1 135 77.8
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.5e-45 186.4 143 74.1
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.0e-45 186.0 144 76.4
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 3.4e-45 185.3 145 73.1
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 4.4e-45 184.9 149 71.1
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.3e-44 183.3 144 71.5
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 2.2e-44 182.6 144 68.1
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 4.9e-44 181.4 146 73.3
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 6.4e-44 181.0 144 68.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.1e-43 180.3 141 73.8
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.4e-43 179.9 144 68.1
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.9e-43 179.5 144 70.8
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 7.0e-43 177.6 144 66.7
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 7.0e-43 177.6 144 68.8
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 9.2e-43 177.2 144 67.4
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.2e-42 176.8 147 72.1
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.2e-42 176.8 144 70.1
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 6.0e-42 174.5 145 66.9
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.0e-42 174.5 144 67.4
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.0e-41 173.7 144 69.4
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 1.0e-41 173.7 125 72.8
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 2.3e-41 172.6 147 69.4
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 3.0e-41 172.2 144 64.6
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.0e-41 172.2 123 74.0
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 3.9e-41 171.8 144 68.1
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 3.9e-41 171.8 144 68.1
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.5e-40 169.9 144 68.1
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.5e-40 169.9 144 68.1
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 3.3e-40 168.7 145 68.3
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.6e-39 166.4 145 65.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 3.6e-39 165.2 144 64.6
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 6.2e-39 164.5 144 68.1
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 6.2e-39 164.5 144 66.0
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.5e-37 159.8 142 66.2
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.0e-37 159.5 147 65.3
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 4.4e-37 158.3 147 63.3
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.8e-37 157.9 142 62.7
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 7.5e-37 157.5 144 64.6
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 7.5e-37 157.5 148 62.8
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.7e-36 156.4 145 62.1
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 2.9e-36 155.6 144 63.2
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.7e-36 155.2 145 66.2
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.1e-35 153.7 144 66.0
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 2.4e-35 152.5 146 63.0
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.2e-35 152.1 144 61.8
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.1e-35 151.0 131 65.6
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.2e-34 150.2 139 64.7
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.6e-34 148.3 131 64.9
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 4.6e-34 148.3 145 60.0
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 7.8e-34 147.5 148 60.8
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.3e-33 146.7 144 61.8
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.7e-33 146.4 149 63.1
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.3e-33 146.0 147 62.6
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 3.9e-33 145.2 140 58.6
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.9e-33 145.2 145 60.0
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 6.6e-33 144.4 92 81.5
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 6.6e-33 144.4 104 76.0
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 8.6e-33 144.1 145 62.1
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 1.1e-32 143.7 145 60.0
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.5e-32 143.3 143 58.7
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.5e-32 143.3 145 58.6
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.5e-32 142.5 139 64.0
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 3.3e-32 142.1 149 59.1
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 4.3e-32 141.7 147 61.2
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 4.3e-32 141.7 122 65.6
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 5.6e-32 141.4 136 58.8
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 7.3e-32 141.0 116 65.5
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 9.5e-32 140.6 161 54.0
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 9.5e-32 140.6 143 58.0
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 1.6e-31 139.8 148 58.8
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 1.6e-31 139.8 148 58.8
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 2.1e-31 139.4 176 54.0
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.8e-31 139.0 149 57.0
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 4.7e-31 138.3 145 57.9
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 8.1e-31 137.5 148 58.8
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 8.1e-31 137.5 148 58.8
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 8.1e-31 137.5 148 58.8
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 1.1e-30 137.1 145 60.7
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.1e-30 137.1 150 57.3
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.4e-30 136.7 135 60.0
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.8e-30 136.3 147 56.5
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.4e-30 136.0 148 58.1
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 3.1e-30 135.6 151 57.0
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.0e-30 135.2 135 58.5
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 6.8e-30 134.4 155 55.5
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 8.9e-30 134.0 150 57.3
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 9.9e-29 130.6 135 56.3
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.7e-28 129.8 131 57.3
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 8.4e-28 127.5 92 70.7
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.1e-27 127.1 82 78.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 4.1e-27 125.2 119 61.3
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 6.6e-25 117.9 113 55.8
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.9e-24 116.3 83 68.7
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.2e-23 113.6 85 71.8
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 6.2e-23 111.3 111 56.8
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 8.1e-23 110.9 131 52.7
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 3.5e-18 95.5 132 48.5
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.3e-17 93.6 78 57.7
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.7e-17 93.2 110 53.6
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.3e-17 92.8 83 56.6
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.9e-16 89.7 102 47.1
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 1.6e-15 86.7 112 43.8
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.8e-14 83.2 55 81.8
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 5.3e-14 81.6 78 53.8
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 5.8e-13 78.2 126 45.2
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 1.7e-12 76.6 82 47.6
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 1.1e-08 63.9 32 96.9
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 4.0e-06 55.5 52 51.9


User provided reference genes

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