Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 5.1e-193 677.6 337 100.0
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 7.6e-173 610.5 340 87.9
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.9e-172 608.6 340 88.2
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 1.9e-171 605.9 340 87.4
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 7.4e-160 567.4 341 82.7
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 7.4e-160 567.4 341 82.7
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.2e-155 552.0 336 81.8
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 3.6e-154 548.5 341 78.6
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 6.1e-154 547.7 340 78.2
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 1.8e-153 546.2 340 78.5
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 3.8e-148 528.5 338 77.2
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 1.1e-147 526.9 340 77.6
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.5e-144 516.5 307 81.8
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 5.7e-144 514.6 338 77.2
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 9.7e-144 513.8 343 75.2
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.8e-142 509.6 347 74.4
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 1.2e-141 506.9 339 74.9
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.5e-141 506.5 340 75.0
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.7e-140 503.1 340 75.0
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 3.8e-140 501.9 326 76.1
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 1.1e-139 500.4 340 72.6
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.5e-139 500.0 350 72.6
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 1.9e-139 499.6 326 76.1
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 5.5e-139 498.0 332 76.5
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 5.5e-139 498.0 348 72.4
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.6e-138 496.5 348 72.1
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 2.1e-138 496.1 329 75.1
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 2.1e-138 496.1 306 77.8
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 2.7e-138 495.7 340 73.8
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 3.6e-138 495.4 340 72.9
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.6e-138 495.4 340 72.9
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 4.7e-138 495.0 340 71.8
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 4.7e-138 495.0 329 74.5
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 6.1e-138 494.6 346 71.1
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 6.1e-138 494.6 332 73.5
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 8.0e-138 494.2 340 71.5
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 8.0e-138 494.2 340 72.6
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 4.0e-137 491.9 329 73.9
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 4.0e-137 491.9 347 72.0
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 6.7e-137 491.1 339 70.8
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 6.7e-137 491.1 342 71.9
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 8.8e-137 490.7 329 73.9
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 1.5e-136 490.0 347 71.5
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 2.6e-136 489.2 318 76.4
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 5.7e-136 488.0 330 72.4
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 5.7e-136 488.0 339 71.4
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 7.4e-136 487.6 344 72.4
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 1.3e-135 486.9 370 67.8
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 1.3e-135 486.9 311 76.8
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 2.8e-135 485.7 329 72.6
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 1.4e-134 483.4 342 70.5
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 2.4e-134 482.6 309 75.7
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 3.1e-134 482.3 322 73.0
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 3.1e-134 482.3 329 73.3
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 3.1e-134 482.3 311 74.6
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 3.5e-133 478.8 333 71.5
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.5e-133 478.8 344 70.3
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 7.7e-133 477.6 343 70.3
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 1.0e-132 477.2 325 72.9
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 1.7e-132 476.5 352 68.8
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 2.9e-132 475.7 341 69.2
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 3.8e-132 475.3 315 72.7
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 5.0e-132 474.9 368 65.8
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 5.0e-132 474.9 311 74.3
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.1e-131 473.8 331 71.3
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.1e-131 473.8 343 69.4
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 1.5e-131 473.4 325 71.1
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.5e-131 473.4 349 68.5
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 3.2e-131 472.2 335 70.7
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 3.2e-131 472.2 315 72.7
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 9.4e-131 470.7 338 70.1
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 9.4e-131 470.7 317 72.2
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 1.2e-130 470.3 355 67.9
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.6e-130 469.9 344 69.5
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 2.1e-130 469.5 318 73.0
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 4.7e-130 468.4 315 73.7
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 3.0e-129 465.7 342 69.6
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 3.0e-129 465.7 311 72.0
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 3.0e-129 465.7 339 68.1
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 4.0e-129 465.3 304 74.3
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 2.0e-128 463.0 340 70.9
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 3.4e-128 462.2 313 73.2
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 4.8e-127 458.4 302 73.5
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 3.5e-125 452.2 286 75.5
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 4.5e-125 451.8 342 67.5
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 5.9e-125 451.4 310 72.3
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 2.2e-124 449.5 343 64.7
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 2.5e-123 446.0 372 62.4
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.5e-123 444.9 279 77.8
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 1.2e-122 443.7 342 65.8
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 2.0e-120 436.4 344 67.2
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 2.0e-120 436.4 336 64.0
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 5.7e-120 434.9 330 67.0
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 1.3e-119 433.7 346 64.2
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.8e-118 429.9 281 74.0
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.4e-118 429.5 306 68.0
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 2.4e-118 429.5 292 73.6
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 4.1e-118 428.7 279 73.8
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 7.7e-117 424.5 328 67.7
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 7.7e-117 424.5 308 66.6
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 1.7e-116 423.3 347 63.1
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 2.9e-116 422.5 305 66.9
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 5.0e-116 421.8 356 63.2
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 8.6e-116 421.0 341 63.0
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 1.6e-114 416.8 280 73.2
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 1.4e-113 413.7 346 62.4
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 8.9e-113 411.0 318 63.8
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 1.5e-112 410.2 355 62.3
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 2.0e-112 409.8 355 62.5
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.5e-112 407.9 309 64.4
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 1.3e-111 407.1 286 72.7
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 3.7e-111 405.6 319 63.6
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 3.7e-111 405.6 324 62.3
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.7e-111 405.6 229 85.6
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 2.4e-110 402.9 324 62.0
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 2.4e-110 402.9 324 62.0
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 2.4e-110 402.9 307 67.4
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 2.4e-110 402.9 311 63.7
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 2.4e-110 402.9 303 66.7
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.2e-109 400.6 317 63.1
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 2.0e-109 399.8 324 61.4
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.7e-109 399.4 320 62.2
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 3.9e-108 395.6 324 60.8
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 1.2e-101 374.0 303 57.8
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 2.7e-101 372.9 282 63.5
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 4.7e-98 362.1 298 58.4
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 5.2e-97 358.6 332 59.3
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 1.2e-96 357.5 359 53.8
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 2.6e-96 356.3 309 55.3
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 3.4e-96 355.9 251 70.1
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 6.4e-95 351.7 256 68.4
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.5e-91 340.5 325 51.1
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.9e-91 340.1 223 74.9
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 2.3e-89 333.2 355 50.7
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 1.3e-87 327.4 308 52.9
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 2.3e-84 316.6 334 48.8
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 1.2e-82 310.8 235 63.8
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.4e-78 296.6 281 55.2
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.7e-76 290.4 318 54.1
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 2.3e-76 290.0 197 76.1
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 2.4e-73 280.0 164 82.3
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 2.8e-58 229.9 173 62.4
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 2.8e-58 229.9 173 62.4
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 3.1e-57 226.5 140 78.6
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 4.5e-48 196.1 112 82.1
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 5.3e-41 172.6 131 61.8
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.6e-40 170.2 112 75.0
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 2.9e-39 166.8 324 31.2
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 4.6e-37 159.5 311 35.0
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.0e-35 154.1 130 60.8
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 7.4e-35 152.1 164 51.8
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 1.4e-33 147.9 308 31.2
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 1.7e-26 124.4 361 31.3
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 6.3e-26 122.5 166 44.0
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.3e-23 114.8 85 67.1
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 1.1e-19 101.7 278 28.8
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 1.9e-14 84.3 105 42.9


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