Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 5.5e-127 457.6 223 100.0
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 2.7e-102 375.6 218 83.9
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 2.0e-89 332.8 209 78.0
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.8e-77 293.1 229 68.1
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 4.0e-77 292.0 227 68.3
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 3.0e-69 265.8 224 60.3
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 2.0e-68 263.1 222 60.4
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 3.2e-66 255.8 222 57.2
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 5.9e-65 251.5 224 57.1
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.3e-64 250.4 224 57.1
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.7e-64 250.0 228 57.0
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 5.6e-63 245.0 219 58.0
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 1.2e-62 243.8 224 57.1
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.4e-61 240.4 227 56.4
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 5.2e-61 238.4 253 51.0
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 8.9e-61 237.7 225 54.7
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 9.8e-60 234.2 221 53.4
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 2.4e-58 229.6 224 50.9
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 3.2e-58 229.2 223 53.4
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 3.2e-58 229.2 226 51.8
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 7.0e-58 228.0 219 53.4
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 3.0e-56 222.6 221 51.6
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 3.9e-56 222.2 213 54.0
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 8.6e-56 221.1 221 52.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 8.6e-56 221.1 221 52.0
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.2e-54 217.2 222 51.8
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 4.0e-53 212.2 222 48.2
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.4e-52 208.8 224 49.1
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-51 206.1 222 50.0
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-51 206.1 222 50.0
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 4.9e-51 205.3 222 45.5
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 8.3e-51 204.5 248 46.4
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 2.4e-50 203.0 248 46.4
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 6.0e-49 198.4 222 49.5
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.0e-48 197.6 245 44.9
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.3e-48 196.4 222 46.8
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 5.1e-48 195.3 234 46.6
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 5.1e-48 195.3 206 51.0
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.9e-47 193.4 165 65.5
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 9.5e-47 191.0 233 48.1
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 3.6e-46 189.1 262 42.0
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.4e-45 187.2 204 50.5
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.1e-45 186.0 267 40.4
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 2.9e-43 179.5 247 43.3
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 7.3e-39 164.9 224 39.7
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 6.2e-38 161.8 223 42.6
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 4.0e-37 159.1 235 40.0
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.2e-35 153.3 141 54.6
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.7e-33 146.4 165 50.3
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 2.6e-28 129.8 260 35.8
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-27 126.3 201 38.3
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 2.9e-27 126.3 185 42.2
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 4.9e-27 125.6 214 36.9
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 7.1e-26 121.7 170 45.9
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 9.3e-26 121.3 167 47.9
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-25 120.9 163 46.0
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 1.2e-25 120.9 163 46.0
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 4.3e-23 112.5 147 44.2
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 3.6e-22 109.4 175 40.6
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 2.6e-20 103.2 129 45.7
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 9.9e-20 101.3 75 57.3
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 9.3e-18 94.7 71 63.4
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 2.2e-11 73.6 52 61.5
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 7.1e-10 68.6 93 43.0


User provided reference genes

Program Settings