Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 4.6e-249 864.4 526 100.0
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 4.2e-226 788.1 486 91.8
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 4.0e-221 771.5 486 84.4
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 3.9e-216 755.0 469 89.1
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 6.5e-211 737.6 485 86.2
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.1e-210 736.9 485 86.2
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 4.2e-202 708.4 472 84.1
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 1.7e-195 686.4 486 77.0
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 3.1e-189 665.6 485 74.6
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 2.9e-187 659.1 479 76.2
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 5.0e-187 658.3 479 76.2
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 2.5e-186 656.0 485 73.0
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 7.2e-186 654.4 490 73.3
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 5.1e-184 648.3 483 76.6
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.1e-183 647.1 465 77.0
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.4e-183 645.2 485 71.8
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 1.4e-181 640.2 490 74.7
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.0e-176 624.0 495 71.5
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 5.2e-176 621.7 470 70.9
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 6.7e-176 621.3 488 70.9
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 2.0e-175 619.8 472 70.6
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 2.0e-175 619.8 455 78.2
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 6.3e-174 614.8 490 69.8
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 8.5e-171 604.4 487 67.8
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 1.9e-170 603.2 487 67.8
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 9.4e-170 600.9 490 71.0
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 4.7e-169 598.6 485 67.2
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 3.0e-168 595.9 488 67.4
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 3.0e-168 595.9 490 70.4
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 2.0e-167 593.2 570 61.8
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 3.7e-166 589.0 490 68.4
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 3.7e-166 589.0 490 70.4
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.1e-165 587.4 497 67.0
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 2.4e-165 586.3 500 65.4
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 4.1e-165 585.5 489 65.8
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 7.0e-165 584.7 512 65.0
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 7.0e-165 584.7 475 69.1
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 9.1e-165 584.3 404 76.0
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.6e-164 583.6 468 67.3
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 2.7e-164 582.8 488 65.6
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 2.7e-164 582.8 509 66.4
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 5.9e-164 581.6 512 64.8
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 7.7e-164 581.3 490 65.5
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.7e-163 580.1 484 65.5
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 5.0e-163 578.6 488 64.3
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 2.5e-162 576.2 490 64.7
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.2e-161 573.9 471 66.5
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 1.4e-160 570.5 490 65.9
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 5.2e-160 568.5 480 65.4
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 4.9e-158 562.0 492 67.9
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.4e-157 560.5 492 65.2
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.4e-157 560.5 492 65.2
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.1e-157 559.3 484 63.4
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 5.9e-156 555.1 486 66.9
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.3e-155 553.9 484 61.4
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 2.9e-155 552.7 405 71.6
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 8.6e-155 551.2 490 64.9
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.1e-154 550.8 404 73.3
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 1.5e-154 550.4 490 67.3
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 5.6e-154 548.5 512 62.7
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 9.5e-154 547.7 411 69.6
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 1.2e-153 547.4 493 65.9
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 2.8e-153 546.2 478 62.8
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 3.6e-153 545.8 490 63.9
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.7e-153 545.4 404 72.0
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 1.4e-152 543.9 484 62.2
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.3e-152 543.1 494 67.4
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 4.0e-152 542.3 493 65.5
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 5.2e-152 542.0 472 63.3
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 1.5e-151 540.4 496 64.9
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 2.0e-151 540.0 503 65.0
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 2.0e-151 540.0 507 64.7
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 5.7e-151 538.5 489 64.8
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 3.7e-150 535.8 478 65.7
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 1.4e-149 533.9 494 65.0
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.4e-149 533.9 449 66.1
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 1.8e-149 533.5 494 62.8
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.8e-149 533.5 490 63.5
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 5.4e-149 531.9 493 65.1
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 3.5e-148 529.3 488 61.1
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 4.6e-148 528.9 519 63.6
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 1.3e-147 527.3 504 60.7
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 5.0e-147 525.4 487 61.0
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 5.0e-147 525.4 473 61.3
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 8.6e-147 524.6 492 62.4
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 8.6e-147 524.6 475 61.1
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 8.6e-147 524.6 476 64.5
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 4.3e-146 522.3 476 61.6
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 1.6e-145 520.4 391 69.6
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 1.4e-144 517.3 497 59.8
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 1.4e-144 517.3 497 59.8
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 2.3e-144 516.5 472 60.8
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 8.9e-144 514.6 481 63.6
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.7e-142 510.4 402 65.9
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 6.4e-142 508.4 427 64.9
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.2e-140 504.2 403 67.7
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 6.0e-140 501.9 391 67.5
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.5e-138 496.5 346 75.1
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 5.2e-136 488.8 488 60.5
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 4.4e-135 485.7 396 66.9
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 2.9e-134 483.0 404 63.9
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 8.3e-134 481.5 473 57.3
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 7.1e-133 478.4 482 57.9
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 2.7e-132 476.5 363 73.0
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 7.8e-132 474.9 406 61.1
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 5.1e-131 472.2 479 63.3
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 9.5e-130 468.0 358 70.9
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 1.4e-128 464.2 486 54.5
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 5.8e-127 458.8 400 68.0
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 6.2e-121 438.7 377 61.3
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 4.6e-116 422.5 345 69.3
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 8.4e-110 401.7 512 49.0
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 2.4e-104 383.6 489 45.6
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 4.0e-104 382.9 283 71.4
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 4.0e-104 382.9 283 71.4
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 5.3e-104 382.5 315 63.5
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 9.6e-98 361.7 492 43.7
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 6.9e-88 328.9 291 59.5
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.2e-87 328.2 322 58.1
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.4e-85 321.2 346 58.4
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 1.4e-85 321.2 271 70.5
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 5.5e-85 319.3 487 41.1
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.8e-83 314.3 233 70.4
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 2.2e-78 297.4 292 57.2
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 2.9e-78 297.0 502 39.6
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.0e-67 260.4 586 35.8
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.1e-66 258.5 177 76.8
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 5.3e-64 249.6 321 52.0
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 3.8e-62 243.4 476 39.9
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 2.9e-54 217.2 188 75.5
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 1.3e-46 191.8 144 69.4
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.2e-46 191.0 144 65.3
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.9e-45 188.0 159 65.4
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.3e-35 154.5 126 66.7
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.2e-34 152.1 109 69.7
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 7.0e-32 142.9 159 66.7
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 9.2e-32 142.5 108 69.4
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 9.2e-32 142.5 108 69.4
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 6.6e-30 136.3 115 61.7
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 6.2e-20 103.2 70 80.0
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.4e-19 102.1 132 48.5
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.3e-19 101.3 167 43.1
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 3.4e-18 97.4 57 84.2
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 1.3e-17 95.5 96 59.4
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 1.3e-17 95.5 68 64.7
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 2.2e-17 94.7 107 49.5
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.6e-15 88.6 72 61.1
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 2.1e-15 88.2 75 64.0
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.6e-12 78.6 82 53.7
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.6e-12 77.4 166 38.0
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.2e-10 72.4 161 36.0
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.2e-10 72.4 158 36.7
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 3.4e-10 70.9 111 44.1
Gorai.002G006600 Gossypium raimondii HOM05D054238 ORTHO05D047831 2.2e-09 68.2 156 35.3
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 2.4e-08 64.7 98 45.9
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 1.2e-07 62.4 254 26.0


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