Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G091900 Theobroma cacao HOM05D008353 ORTHO05D011820 1.9e-71 272.3 131 100.0
Thecc.02G091700 Theobroma cacao HOM05D008353 ORTHO05D011820 6.0e-49 197.6 131 72.5
Thecc.02G091400 Theobroma cacao HOM05D008353 ORTHO05D011820 6.6e-48 194.1 130 70.0
COL.COLO4_11747 Corchorus olitorius HOM05D008353 ORTHO05D011820 2.8e-38 162.2 131 60.3
Gorai.011G060700 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.2e-33 146.7 131 52.7
Gohir.D10G057000 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.1e-33 146.0 131 51.9
Gohir.D10G056900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.7e-33 145.6 131 51.9
Gohir.A10G055250 Gossypium hirsutum HOM05D008353 ORTHO05D011820 6.0e-33 144.4 123 54.5
Gohir.A10G054900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 7.9e-33 144.1 131 51.9
Gorai.011G061300 Gossypium raimondii HOM05D008353 ORTHO05D011820 7.9e-33 144.1 131 51.1
Gohir.D10G057200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.7e-32 142.9 131 50.4
Gorai.011G060900 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.7e-32 142.9 131 50.4
Gohir.A10G054800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.9e-32 141.7 131 55.0
Gohir.D10G056800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 8.7e-32 140.6 131 54.2
Gorai.011G061000 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.1e-31 140.2 131 51.1
Gorai.011G060600 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.5e-31 139.8 131 54.2
Gohir.1Z049336 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.6e-31 137.1 131 50.4
Gohir.D10G057100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.6e-31 137.1 131 50.4
Gohir.A10G055200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.3e-30 136.7 131 50.4
Gohir.A10G055100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.8e-30 135.6 131 49.6
Gohir.A10G054950 Gossypium hirsutum HOM05D008353 ORTHO05D011820 6.2e-30 134.4 121 51.2
Gorai.008G022100 Gossypium raimondii HOM05D008353 ORTHO05D011820 8.1e-30 134.0 132 47.0
Gohir.D12G021800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.1e-29 133.7 132 47.0
Gohir.D10G057133 Gossypium hirsutum HOM05D008353 ORTHO05D011820 8.4e-27 124.0 131 44.3
Gorai.011G061100 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.4e-26 123.2 131 44.3
Gohir.A10G055150 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.2e-26 122.1 131 45.0
Gohir.A10G055066 Gossypium hirsutum HOM05D008353 ORTHO05D011820 7.4e-23 110.9 131 41.2
Gorai.008G022300 Gossypium raimondii HOM05D008353 ORTHO05D218896 1.8e-21 106.3 131 41.2
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 4.9e-19 98.2 117 43.6
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 2.3e-16 89.4 118 40.7
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 8.7e-16 87.4 118 39.8
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 1.9e-15 86.3 118 40.7
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 2.5e-15 85.9 120 39.2
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.5e-15 85.9 118 39.8
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 3.3e-15 85.5 118 39.0
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.3e-15 85.1 118 38.1
Manes.07G022000 Manihot esculenta HOM05D008353 ORTHO05D001895 1.3e-14 83.6 128 35.9
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.3e-14 83.6 118 39.0
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.3e-14 83.6 118 39.0
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 1.6e-14 83.2 115 38.3
Manes.07G021800 Manihot esculenta HOM05D008353 ORTHO05D001895 3.7e-14 82.0 126 33.3
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 1.4e-13 80.1 118 38.1
COL.COLO4_11746 Corchorus olitorius HOM05D008353 ORTHO05D001895 2.4e-13 79.3 122 38.5
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 6.9e-13 77.8 117 37.6
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 9.0e-13 77.4 116 37.1
Gohir.A03G192200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 4.5e-12 75.1 114 39.5
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 4.5e-12 75.1 115 37.4
Gohir.A03G192300 Gossypium hirsutum HOM05D008353 ORTHO05D001895 7.6e-12 74.3 119 37.0
Thecc.02G091600 Theobroma cacao HOM05D008353 ORTHO05D001895 7.6e-12 74.3 115 40.0
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 1.7e-11 73.2 120 35.8
Gohir.D02G213200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 2.9e-11 72.4 119 38.7
Gorai.005G241100 Gossypium raimondii HOM05D008353 ORTHO05D001895 2.9e-11 72.4 119 38.7
Gohir.D02G213100 Gossypium hirsutum HOM05D008353 ORTHO05D001895 6.5e-11 71.2 119 37.8
Gorai.005G241000 Gossypium raimondii HOM05D008353 ORTHO05D001895 6.5e-11 71.2 119 37.8
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 8.4e-11 70.9 115 36.5
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 8.4e-11 70.9 121 33.9
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.2e-10 68.9 121 33.9
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.3e-10 67.4 122 33.6
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 9.3e-10 67.4 119 33.6
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-09 67.0 122 33.6
Potri.003G011200 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.6e-09 66.6 115 32.2
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 7.9e-09 64.3 121 32.2
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.0e-08 63.9 122 36.1
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 1.3e-08 63.5 118 33.1
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.0e-08 62.4 120 31.7
Thecc.07G072800 Theobroma cacao HOM05D008353 ORTHO05D001895 7.4e-07 57.8 126 27.8
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.7e-07 57.4 120 32.5
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.2e-06 54.3 120 30.8


User provided reference genes

Program Settings