Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G091600 Theobroma cacao HOM05D008353 ORTHO05D001895 2.4e-68 261.9 124 100.0
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 2.4e-23 112.5 110 46.4
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.6e-14 83.2 110 40.0
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 4.5e-14 81.6 116 38.8
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 7.7e-14 80.9 116 37.9
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 1.7e-13 79.7 117 36.8
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 3.8e-13 78.6 114 37.7
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 5.0e-13 78.2 113 37.2
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 5.0e-13 78.2 113 37.2
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 1.1e-12 77.0 112 37.5
Gohir.A10G055250 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.5e-12 76.6 114 36.8
Gohir.D10G057200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.5e-12 75.9 118 37.3
Gorai.011G061300 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.5e-12 75.9 118 37.3
Manes.07G021800 Manihot esculenta HOM05D008353 ORTHO05D001895 2.5e-12 75.9 115 37.4
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.5e-12 75.9 113 36.3
Thecc.02G091900 Theobroma cacao HOM05D008353 ORTHO05D011820 2.5e-12 75.9 115 40.0
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 3.2e-12 75.5 111 36.9
Manes.07G022000 Manihot esculenta HOM05D008353 ORTHO05D001895 3.2e-12 75.5 115 38.3
Gorai.011G060900 Gossypium raimondii HOM05D008353 ORTHO05D011820 5.5e-12 74.7 118 36.4
Gohir.D10G057000 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.2e-11 73.6 116 36.2
Gohir.A10G054950 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.1e-11 72.8 116 35.3
Gorai.011G060700 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.1e-11 72.8 117 36.8
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 2.7e-11 72.4 113 36.3
Gohir.D10G056900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.7e-11 71.6 117 35.9
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 8.0e-11 70.9 113 35.4
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 8.0e-11 70.9 114 37.7
Gorai.011G061000 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.4e-10 70.1 118 33.1
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 1.4e-10 70.1 114 34.2
Gohir.A10G055200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.0e-10 68.9 118 33.9
Gorai.008G022100 Gossypium raimondii HOM05D008353 ORTHO05D011820 6.8e-10 67.8 128 32.8
Gohir.1Z049336 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.5e-09 66.6 116 32.8
Gohir.D10G057100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.5e-09 66.6 116 32.8
Gohir.D12G021800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.0e-09 66.2 128 32.0
Thecc.02G091700 Theobroma cacao HOM05D008353 ORTHO05D011820 2.0e-09 66.2 119 36.1
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 2.0e-09 66.2 114 37.7
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 3.4e-09 65.5 112 38.4
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.5e-09 64.3 114 28.9
Thecc.07G072800 Theobroma cacao HOM05D008353 ORTHO05D001895 7.5e-09 64.3 122 32.0
Gohir.A03G192300 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.3e-08 63.5 125 34.4
Gohir.A10G054800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.3e-08 63.5 117 34.2
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-08 63.5 114 30.7
Gohir.A10G054900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.7e-08 63.2 117 33.3
COL.COLO4_11746 Corchorus olitorius HOM05D008353 ORTHO05D001895 2.2e-08 62.8 115 36.5
Gohir.A03G192200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 2.8e-08 62.4 115 35.7
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.8e-08 62.4 114 29.8
Gorai.011G060600 Gossypium raimondii HOM05D008353 ORTHO05D011820 6.3e-08 61.2 125 33.6
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 8.3e-08 60.8 113 33.6
Gohir.D10G056800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 8.3e-08 60.8 125 33.6
Gohir.A10G055150 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.8e-07 59.7 118 32.2
Gohir.D02G213200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 3.1e-07 58.9 116 32.8
Gorai.005G241100 Gossypium raimondii HOM05D008353 ORTHO05D001895 3.1e-07 58.9 116 32.8
Gohir.D10G057133 Gossypium hirsutum HOM05D008353 ORTHO05D011820 9.2e-07 57.4 117 31.6
Gohir.A10G055066 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.2e-06 57.0 117 29.9
Gorai.011G061100 Gossypium raimondii HOM05D008353 ORTHO05D011820 3.5e-06 55.5 117 30.8
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 5.9e-06 54.7 109 29.4


User provided reference genes

Program Settings