Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 1.2e-64 250.0 158 100.0
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.1e-33 147.1 126 65.1
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 5.7e-30 134.8 123 64.2
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 3.7e-29 132.1 123 61.8
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 7.8e-27 124.4 126 61.9
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.2e-21 106.3 126 53.2
COL.COLO4_03329 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.9e-21 105.9 123 57.7
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.9e-21 105.9 123 56.1
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.4e-20 102.8 114 57.9
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 3.3e-17 92.4 145 53.1
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.1e-16 87.8 163 40.5
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 5.2e-15 85.1 159 45.3
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.4e-14 82.4 86 57.0
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 9.8e-14 80.9 114 48.2
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.7e-13 80.1 95 50.5
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 2.2e-13 79.7 117 44.4
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-13 79.0 100 48.0
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.3e-13 77.8 122 42.6
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.1e-12 77.4 122 41.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 5.4e-12 75.1 123 43.1
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.2e-12 74.3 122 41.8
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.2e-11 73.9 95 44.2
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.5e-11 72.4 122 40.2
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 6.0e-11 71.6 92 48.9
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 1.0e-10 70.9 85 45.9
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.3e-10 70.5 88 48.9
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.7e-10 70.1 86 45.3
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.7e-10 70.1 95 48.4
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 2.3e-10 69.7 85 48.2
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 3.9e-10 68.9 108 42.6
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 6.6e-10 68.2 97 42.3
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.1e-09 67.4 89 43.8
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.5e-09 67.0 125 38.4
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.3e-09 65.9 122 39.3
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.3e-09 65.9 97 43.3
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 7.3e-09 64.7 89 44.9
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 7.3e-09 64.7 89 44.9
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 9.5e-09 64.3 93 45.2
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 9.5e-09 64.3 89 42.7
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.2e-08 63.9 89 42.7
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 1.6e-08 63.5 119 39.5
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.1e-08 63.2 85 45.9
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.1e-08 63.2 106 40.6
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 2.8e-08 62.8 93 43.0
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.8e-08 62.8 110 39.1
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 4.7e-08 62.0 121 38.8
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.2e-08 61.6 87 44.8
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 8.1e-08 61.2 149 30.9
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 1.1e-07 60.8 118 36.4
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.4e-07 60.5 95 40.0
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 2.3e-07 59.7 73 43.8
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.1e-07 59.3 79 43.0
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 5.2e-07 58.5 88 47.7
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 8.9e-07 57.8 113 40.7
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 8.9e-07 57.8 123 33.3
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 1.2e-06 57.4 85 42.4
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 1.2e-06 57.4 122 36.9
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.6e-06 56.2 113 38.1
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 2.6e-06 56.2 121 34.7
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 3.4e-06 55.8 85 43.5
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 4.4e-06 55.5 108 38.0
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 4.4e-06 55.5 91 36.3
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 4.4e-06 55.5 157 38.9
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 5.8e-06 55.1 88 38.6
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 7.6e-06 54.7 113 37.2
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 7.6e-06 54.7 116 37.9


User provided reference genes

Program Settings