Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G080300 Theobroma cacao HOM05D017494 ORTHO05D020490 2.8e-160 568.5 285 100.0
Duzib132G0932 Durio zibethinus HOM05D017494 ORTHO05D020490 3.1e-58 229.6 171 67.8
COL.COLO4_05439 Corchorus olitorius HOM05D017494 ORTHO05D020490 2.8e-35 153.3 239 42.7
Gorai.005G246100 Gossypium raimondii HOM05D017494 ORTHO05D020490 1.3e-32 144.4 228 43.0
COL.COLO4_25991 Corchorus olitorius HOM05D017494 ORTHO05D020490 5.0e-32 142.5 166 49.4
Gohir.D02G218200 Gossypium hirsutum HOM05D017494 ORTHO05D020490 1.9e-31 140.6 230 42.6
TWI53G1495 Tripterygium wilfordii HOM05D017494 ORTHO05D020490 1.8e-13 80.9 242 29.8
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.8e-10 70.9 264 26.1
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 5.3e-10 69.3 258 26.4
Gorai.001G124500 Gossypium raimondii HOM05D002687 ORTHO05D002052 2.7e-09 67.0 190 28.4
Gohir.D07G116000 Gossypium hirsutum HOM05D002687 ORTHO05D002052 3.5e-09 66.6 190 27.9
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 1.3e-08 64.7 166 25.9
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 1.3e-08 64.7 166 25.9
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 1.7e-08 64.3 152 28.9
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 2.2e-08 63.9 187 27.8
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 2.2e-08 63.9 187 27.8
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 2.9e-08 63.5 243 25.5
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 3.8e-08 63.2 232 24.6
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.8e-08 63.2 184 26.1
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 5.0e-08 62.8 108 33.3
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 5.0e-08 62.8 158 28.5
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 8.5e-08 62.0 225 25.8
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.5e-08 62.0 151 30.5
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.5e-08 62.0 166 27.7
HanXRQChr13g0403571 Helianthus annuus HOM05D000733 ORTHO05D000649 1.1e-07 61.6 180 23.9
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 1.1e-07 61.6 166 25.9
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 1.5e-07 61.2 179 25.7
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 1.9e-07 60.8 228 28.1
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 3.2e-07 60.1 157 28.0
HanXRQChr14g0432161 Helianthus annuus HOM05D002687 ORTHO05D002052 3.2e-07 60.1 178 25.3
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 4.2e-07 59.7 82 35.4
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 4.2e-07 59.7 206 24.8
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 4.2e-07 59.7 257 24.1
Rhsim04G0206200 Rhododendron simsii HOM05D018759 ORTHO05D012721 5.5e-07 59.3 200 28.0
COL.COLO4_22662 Corchorus olitorius HOM05D002687 ORTHO05D002052 7.2e-07 58.9 229 25.8
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.2e-07 58.9 240 25.8
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.2e-07 58.9 240 25.8
Aa31LG5G8460 Aethionema arabicum HOM05D000973 ORTHO05D000652 9.4e-07 58.5 165 27.9
Dinv31534 Davidia involucrata HOM05D002687 ORTHO05D002052 9.4e-07 58.5 166 25.3
Prupe.7G096300 Prunus persica HOM05D010052 ORTHO05D010666 9.4e-07 58.5 170 27.6
HanXRQChr13g0420231 Helianthus annuus HOM05D002687 ORTHO05D002052 1.2e-06 58.2 179 26.8
RcHm_v2.0_Chr3g0475771 Rosa chinensis HOM05D010052 ORTHO05D010666 1.6e-06 57.8 141 29.1
Thecc.09G275200 Theobroma cacao HOM05D002687 ORTHO05D002052 1.6e-06 57.8 190 26.8
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 2.1e-06 57.4 173 24.3
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 2.1e-06 57.4 183 23.5
TPR.G4231 Trifolium pratense HOM05D002687 ORTHO05D002052 2.1e-06 57.4 148 27.0
CANSAT54G2775 Cannabis sativa HOM05D002687 ORTHO05D002052 2.7e-06 57.0 172 26.7
Rhsim04G0206100 Rhododendron simsii HOM05D018759 ORTHO05D012721 2.7e-06 57.0 159 29.6
Lj1P303T22 Lonicera japonica HOM05D023306 ORTHO05D002052 3.6e-06 56.6 147 25.9
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 4.7e-06 56.2 159 28.9
COL.COLO4_37164 Corchorus olitorius HOM05D002687 ORTHO05D002052 4.7e-06 56.2 145 26.9
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 4.7e-06 56.2 178 25.3
Cc01_g08570 Coffea canephora HOM05D002687 ORTHO05D002052 6.1e-06 55.8 187 24.1
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 6.1e-06 55.8 100 31.0
AT2G27080 Arabidopsis thaliana HOM05D000973 ORTHO05D000652 8.0e-06 55.5 168 28.6
Sabra16G0321200 Salix brachista HOM05D002456 ORTHO05D002994 8.0e-06 55.5 129 26.4
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.0e-06 55.5 188 25.0


User provided reference genes

Program Settings