Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 1.4e-34 149.1 77 100.0
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 7.6e-20 100.1 85 68.2
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 2.9e-19 98.2 85 68.2
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 5.0e-19 97.4 85 67.1
COL.COLO4_17778 Corchorus olitorius HOM05D009338 ORTHO05D010862 9.7e-15 83.2 125 48.8
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 3.7e-14 81.3 85 62.4
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.8e-13 79.0 84 59.5
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 9.1e-13 76.6 84 54.8
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 1.7e-11 72.4 84 53.6
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 1.9e-10 68.9 80 56.2
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 4.6e-09 64.3 81 51.9
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 6.1e-09 63.9 81 50.6
Nn5g29412 Nelumbo nucifera HOM05D009338 ORTHO05D010862 3.0e-08 61.6 82 47.6
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 3.0e-08 61.6 84 50.0
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 8.8e-08 60.1 74 51.4
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 1.5e-07 59.3 83 47.0
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 2.0e-07 58.9 81 48.1
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 3.3e-07 58.2 78 47.4
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 3.3e-07 58.2 82 46.3
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 7.4e-07 57.0 82 43.9
Aqoxy6G00946 Aquilegia oxysepala HOM05D009338 ORTHO05D010862 1.7e-06 55.8 78 43.6
arahy.Tifrunner.gnm1.ann1.GM2IDW Arachis hypogaea HOM05D016074 ORTHO05D010862 2.2e-06 55.5 80 43.8
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 2.8e-06 55.1 83 47.0
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 3.7e-06 54.7 81 46.9


User provided reference genes

Program Settings