Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 8.0e-36 153.3 81 100.0
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.3e-22 109.4 81 72.8
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.7e-22 109.0 81 72.8
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 3.3e-21 104.8 81 71.6
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.8e-19 99.0 81 64.2
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.5e-18 95.9 81 63.0
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 9.8e-18 93.2 81 60.5
COL.COLO4_17778 Corchorus olitorius HOM05D009338 ORTHO05D010862 4.6e-15 84.3 127 45.7
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 5.0e-14 80.9 85 62.4
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 2.8e-12 75.1 81 54.3
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 1.1e-11 73.2 81 49.4
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 5.2e-11 70.9 82 51.2
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 6.8e-11 70.5 80 53.8
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 2.6e-10 68.6 80 47.5
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 7.5e-10 67.0 80 50.0
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 7.5e-10 67.0 81 49.4
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 9.9e-10 66.6 82 48.8
Nn5g29412 Nelumbo nucifera HOM05D009338 ORTHO05D010862 9.9e-10 66.6 83 49.4
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 1.3e-09 66.2 80 51.2
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 1.3e-09 66.2 83 51.8
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 8.3e-09 63.5 81 45.7
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 1.4e-08 62.8 78 51.3
Manes.17G096700 Manihot esculenta HOM05D009338 ORTHO05D010862 9.2e-08 60.1 80 47.5
Sabra09G0083400 Salix brachista HOM05D009338 ORTHO05D010862 1.6e-07 59.3 81 43.2
Ciclev10029719m.g Citrus clementina HOM05D009338 ORTHO05D010862 2.7e-07 58.5 84 48.8
Phvul.011G050200 Phaseolus vulgaris HOM05D016074 ORTHO05D010862 6.0e-07 57.4 81 45.7
RcHm_v2.0_Chr6g0260801 Rosa chinensis HOM05D026488 ORTHO05D029694 6.0e-07 57.4 84 53.6
Lalb_Chr01g0002981 Lupinus albus HOM05D016074 ORTHO05D010862 1.7e-06 55.8 81 44.4
Aqoxy6G00946 Aquilegia oxysepala HOM05D009338 ORTHO05D010862 2.3e-06 55.5 82 42.7
Rhsim11G0170900 Rhododendron simsii HOM05D009338 ORTHO05D010862 2.3e-06 55.5 82 46.3
CiPaw.05G058900 Carya illinoinensis HOM05D009338 ORTHO05D010862 3.0e-06 55.1 79 43.0
Ciclev10029668m.g Citrus clementina HOM05D009338 ORTHO05D010862 3.0e-06 55.1 95 42.1
Prupe.8G112400 Prunus persica HOM05D026488 ORTHO05D029694 6.6e-06 53.9 79 43.0
Cpa.g.sc62.85 Carica papaya HOM05D009338 ORTHO05D010862 8.6e-06 53.5 83 45.8


User provided reference genes

Program Settings