Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G028000 Theobroma cacao HOM05D004388 ORTHO05D005106 1.2e-56 223.0 122 100.0
Gorai.002G214600 Gossypium raimondii HOM05D004388 ORTHO05D005106 8.9e-47 190.3 122 87.7
Gohir.D01G173000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 1.5e-46 189.5 122 87.7
Gohir.A01G181900 Gossypium hirsutum HOM05D004388 ORTHO05D005106 7.5e-46 187.2 122 85.2
Duzib248G0127 Durio zibethinus HOM05D004388 ORTHO05D005106 2.1e-43 179.1 124 83.1
Duzib248G1645 Durio zibethinus HOM05D004388 ORTHO05D005106 4.6e-43 177.9 124 81.5
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 7.8e-43 177.2 121 80.2
Potri.009G108700 Populus trichocarpa HOM05D004388 ORTHO05D005106 7.8e-43 177.2 124 81.5
Duzib052G1120 Durio zibethinus HOM05D004388 ORTHO05D005106 1.0e-42 176.8 124 80.6
Duzib248G0675 Durio zibethinus HOM05D004388 ORTHO05D005106 1.7e-42 176.0 118 84.7
Duzib132G0841 Durio zibethinus HOM05D004388 ORTHO05D005106 2.3e-42 175.6 126 79.4
Sabra09G0082900 Salix brachista HOM05D004388 ORTHO05D005106 3.0e-42 175.3 124 81.5
Gorai.005G264100 Gossypium raimondii HOM05D004388 ORTHO05D005106 2.5e-41 172.2 126 77.8
Gohir.A03G214500 Gossypium hirsutum HOM05D004388 ORTHO05D005106 7.3e-41 170.6 126 76.2
Gohir.D02G236000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 7.3e-41 170.6 126 77.0
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 2.1e-40 169.1 126 76.2
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 6.2e-40 167.5 126 75.4
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 4.0e-39 164.9 126 73.8
RcHm_v2.0_Chr3g0487591 Rosa chinensis HOM05D004388 ORTHO05D005106 5.2e-39 164.5 124 73.4
CSS0020304 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 6.8e-39 164.1 123 73.2
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 1.2e-38 163.3 123 73.2
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 1.2e-38 163.3 126 73.8
Prupe.8G112900 Prunus persica HOM05D004388 ORTHO05D005106 1.5e-38 162.9 123 75.6
Potri.004G147300 Populus trichocarpa HOM05D004388 ORTHO05D005106 2.6e-38 162.2 124 75.0
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 7.6e-38 160.6 124 71.8
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 7.6e-38 160.6 126 73.0
FvH4_1g27200 Fragaria vesca HOM05D004388 ORTHO05D005106 1.3e-37 159.8 123 72.4
CiPaw.05G058500 Carya illinoinensis HOM05D004388 ORTHO05D005106 1.7e-37 159.5 120 74.2
FAN26G1198 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.7e-37 159.5 123 72.4
FAN28G0470 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.7e-37 159.5 123 72.4
QL03p018404 Quercus lobata HOM05D004388 ORTHO05D005106 1.7e-37 159.5 120 73.3
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 1.7e-37 159.5 127 72.4
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 2.2e-37 159.1 126 72.2
Nn5g29406 Nelumbo nucifera HOM05D004388 ORTHO05D005106 2.2e-37 159.1 127 73.2
QL11p039202 Quercus lobata HOM05D004388 ORTHO05D005106 2.2e-37 159.1 120 73.3
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 2.9e-37 158.7 121 73.6
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 3.7e-37 158.3 126 73.0
FAN19G2330 Fragaria x ananassa HOM05D004388 ORTHO05D005106 4.9e-37 157.9 123 71.5
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 6.4e-37 157.5 129 71.3
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 8.3e-37 157.1 124 71.0
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.3e-37 157.1 124 71.0
FAN23G2994 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.3e-37 157.1 123 71.5
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.4e-36 156.4 123 72.4
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.4e-36 156.4 124 71.0
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.4e-36 156.4 124 71.0
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 1.9e-36 156.0 127 69.3
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.4e-36 155.6 123 73.2
FAN28G0922 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.4e-36 155.6 123 72.4
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 7.1e-36 154.1 124 70.2
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 7.1e-36 154.1 123 71.5
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 7.1e-36 154.1 123 71.5
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.6e-35 152.9 123 70.7
MD05G1072400 Malus domestica HOM05D004388 ORTHO05D005106 2.7e-35 152.1 124 71.8
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 4.6e-35 151.4 126 68.3
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 1.3e-34 149.8 126 66.7
Sed0011034 Sechium edule HOM05D004388 ORTHO05D005106 3.0e-34 148.7 125 69.6
ECA236G2461 Erigeron canadensis HOM05D004388 ORTHO05D005106 8.6e-34 147.1 128 68.8
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 8.6e-34 147.1 120 70.8
CSS0032006 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 1.1e-33 146.7 102 73.5
Glyma.07G163600 Glycine max HOM05D004388 ORTHO05D005106 1.1e-33 146.7 125 66.4
Cpa.g.sc64.17 Carica papaya HOM05D004388 ORTHO05D005106 1.9e-33 146.0 123 65.9
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 1.9e-33 146.0 124 68.5
DCAR_001610 Daucus carota HOM05D004388 ORTHO05D005106 1.9e-33 146.0 124 69.4
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 1.9e-33 146.0 117 70.9
MBI16_g31481_MAGBIO Magnolia biondii HOM05D004388 ORTHO05D005106 4.3e-33 144.8 129 64.3
Nitab4.5_0008194g0060 Nicotiana tabacum HOM05D004388 ORTHO05D005106 4.3e-33 144.8 120 69.2
TAR625G0696 Trochodendron aralioides HOM05D004388 ORTHO05D005106 4.3e-33 144.8 128 67.2
GSVIVG01009587001 Vitis vinifera HOM05D004388 ORTHO05D005106 4.3e-33 144.8 125 67.2
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 5.6e-33 144.4 128 67.2
PGSC0003DMG400006208 Solanum tuberosum HOM05D004388 ORTHO05D005106 5.6e-33 144.4 125 68.8
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 1.2e-32 143.3 125 67.2
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 1.2e-32 143.3 126 65.1
MSTRG.20123 Avicennia marina HOM05D004388 ORTHO05D005106 1.6e-32 142.9 117 65.8
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 2.1e-32 142.5 125 68.0
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 3.6e-32 141.7 123 65.0
Sc15g0006590 Simmondsia chinensis HOM05D004388 ORTHO05D005106 4.7e-32 141.4 126 65.1
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 6.2e-32 141.0 127 66.9
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 6.2e-32 141.0 120 62.5
MD10G1086700 Malus domestica HOM05D004388 ORTHO05D005106 8.1e-32 140.6 115 68.7
Migut.B00292 Erythranthe guttata HOM05D004388 ORTHO05D005106 1.1e-31 140.2 120 63.3
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 1.4e-31 139.8 126 65.9
Lalb_Chr01g0003011 Lupinus albus HOM05D004388 ORTHO05D005106 1.4e-31 139.8 104 73.1
Ca_12477_v3 Cicer arietinum L. HOM05D004388 ORTHO05D005106 1.8e-31 139.4 125 61.6
Sopen10g022090 Solanum pennellii HOM05D004388 ORTHO05D005106 1.8e-31 139.4 127 68.5
Atru.BG.71.p Acer truncatum HOM05D004388 ORTHO05D005106 2.4e-31 139.0 94 80.9
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 2.4e-31 139.0 125 64.8
Sopen01g051240 Solanum pennellii HOM05D004388 ORTHO05D005106 4.0e-31 138.3 125 65.6
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 5.2e-31 137.9 125 66.4
DCAR_000094 Daucus carota HOM05D004388 ORTHO05D005106 6.8e-31 137.5 123 65.0
DCAR_029046 Daucus carota HOM05D004388 ORTHO05D005106 6.8e-31 137.5 123 65.0
Eucgr.I01216 Eucalyptus grandis HOM05D004388 ORTHO05D005106 6.8e-31 137.5 107 70.1
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 6.8e-31 137.5 126 65.9
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 6.8e-31 137.5 122 65.6
Thecc.08G017000 Theobroma cacao HOM05D004388 ORTHO05D005106 6.8e-31 137.5 128 64.8
Glyma.06G035900 Glycine max HOM05D004388 ORTHO05D005106 8.9e-31 137.1 124 64.5
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 1.2e-30 136.7 128 66.4
Medtr1g034260 Medicago truncatula HOM05D004388 ORTHO05D005106 1.2e-30 136.7 128 64.8
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 1.2e-30 136.7 124 64.5
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 1.2e-30 136.7 123 63.4
Solyc01g109040.4 Solanum lycopersicum HOM05D004388 ORTHO05D005106 1.2e-30 136.7 125 64.8
HanXRQChr04g0128391 Helianthus annuus HOM05D004388 ORTHO05D005106 2.0e-30 136.0 122 65.6
Potri.014G037000 Populus trichocarpa HOM05D004388 ORTHO05D005106 3.4e-30 135.2 126 63.5
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 4.4e-30 134.8 126 63.5
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 4.4e-30 134.8 125 61.6
Sabra14G0026600 Salix brachista HOM05D004388 ORTHO05D005106 4.4e-30 134.8 127 65.4
SalBow6G5992 Salvia bowleyana HOM05D004388 ORTHO05D005106 4.4e-30 134.8 111 66.7
TWI56G1138 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 7.6e-30 134.0 127 63.0
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 1.3e-29 133.3 124 58.9
unitig_744.g24243 Utricularia gibba HOM05D004388 ORTHO05D005106 1.7e-29 132.9 121 65.3
Glyma.04G035900 Glycine max HOM05D004388 ORTHO05D005106 2.2e-29 132.5 123 63.4
unitig_21.g20762 Utricularia gibba HOM05D004388 ORTHO05D005106 2.9e-29 132.1 121 63.6
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 3.8e-29 131.7 122 64.8
Phvul.009G061900 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 3.8e-29 131.7 127 59.1
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 4.9e-29 131.3 123 63.4
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 6.4e-29 131.0 101 69.3
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 6.4e-29 131.0 125 60.0
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 8.4e-29 130.6 126 62.7
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 1.4e-28 129.8 125 64.0
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.4e-28 129.8 98 69.4
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 1.9e-28 129.4 122 63.1
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 1.9e-28 129.4 125 60.0
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 1.9e-28 129.4 124 59.7
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 3.2e-28 128.6 123 64.2
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 4.2e-28 128.3 126 60.3
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 5.4e-28 127.9 122 62.3
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 5.4e-28 127.9 126 61.1
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 5.4e-28 127.9 126 61.1
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 7.1e-28 127.5 126 61.1
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 7.1e-28 127.5 126 61.1
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 7.1e-28 127.5 126 61.1
unitig_0.g849 Utricularia gibba HOM05D004388 ORTHO05D005106 1.2e-27 126.7 119 61.3
Lalb_Chr08g0245721 Lupinus albus HOM05D004388 ORTHO05D005106 2.1e-27 125.9 124 56.5
CARHR118500 Cardamine hirsuta HOM05D004388 ORTHO05D005106 3.5e-27 125.2 126 59.5
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 7.8e-27 124.0 121 58.7
Carub.0004s0666 Capsella rubella HOM05D004388 ORTHO05D005106 1.3e-26 123.2 125 60.0
AL4G19340 Arabidopsis lyrata HOM05D004388 ORTHO05D005106 1.7e-26 122.9 125 60.0
Lj1g0026402 Lotus japonicus HOM05D004388 ORTHO05D005106 1.7e-26 122.9 128 58.6
AT2G26500 Arabidopsis thaliana HOM05D004388 ORTHO05D005106 3.9e-26 121.7 125 59.2
Aa31LG5G9370 Aethionema arabicum HOM05D004388 ORTHO05D005106 6.6e-26 120.9 124 58.9
TWI12G0249 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 1.5e-25 119.8 130 59.2
TWI36G1636 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 5.6e-25 117.9 129 57.4
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 2.1e-24 115.9 126 56.3
Psat6g097040 Pisum sativum HOM05D004388 ORTHO05D005106 3.6e-24 115.2 131 56.5
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 6.2e-24 114.4 129 57.4
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 7.6e-22 107.5 123 54.5
HPP92_017776 Vanilla planifolia HOM05D004388 ORTHO05D005106 1.7e-21 106.3 120 55.0
Rhsim05G0079000 Rhododendron simsii HOM05D004388 ORTHO05D005106 3.8e-21 105.1 124 54.0
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 3.2e-20 102.1 117 49.6
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 7.9e-19 97.4 122 49.2
Potri.002G130000 Populus trichocarpa HOM05D004388 ORTHO05D005106 6.6e-18 94.4 105 57.1
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 4.3e-17 91.7 88 55.7
TPR.G40836 Trifolium pratense HOM05D004388 ORTHO05D005106 6.2e-16 87.8 73 65.8
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 1.8e-15 86.3 121 41.3
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 4.0e-15 85.1 123 42.3
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 4.0e-15 85.1 116 44.8
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.2e-14 83.6 71 64.8
CDE01G0191 Ceratophyllum demersum HOM05D004388 ORTHO05D005106 2.0e-14 82.8 50 86.0
BcaB08g35304 Brassica carinata HOM05D004388 ORTHO05D005106 7.6e-14 80.9 51 82.4
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 9.9e-14 80.5 119 42.9
Oeu010570.1 Olea europaea HOM05D000395 ORTHO05D000088 1.7e-13 79.7 81 58.0
Psat4g068600 Pisum sativum HOM05D004388 ORTHO05D005106 1.1e-12 77.0 108 50.9
CBR_g48936 Chara braunii HOM05D004388 ORTHO05D005106 5.4e-12 74.7 128 45.3
Psat3g122680 Pisum sativum HOM05D004388 ORTHO05D005106 3.7e-08 62.0 111 44.1
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 1.2e-06 57.0 78 46.2
CAN.G322.45 Capsicum annuum HOM05D000224 ORTHO05D000337 2.6e-06 55.8 57 54.4


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