Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G027700 Theobroma cacao HOM05D011434 ORTHO05D013585 1.8e-53 212.2 102 100.0
Thecc.02G026700 Theobroma cacao HOM05D011434 ORTHO05D013585 2.5e-50 201.8 102 94.1
Thecc.02G027000 Theobroma cacao HOM05D011434 ORTHO05D013585 5.2e-48 194.1 102 90.2
Thecc.02G027300 Theobroma cacao HOM05D011434 ORTHO05D013585 5.2e-48 194.1 102 91.2
Thecc.02G027100 Theobroma cacao HOM05D011434 ORTHO05D013585 6.1e-33 144.1 100 70.0
Thecc.02G027400 Theobroma cacao HOM05D011434 ORTHO05D013585 6.1e-33 144.1 100 70.0
Thecc.02G027200 Theobroma cacao HOM05D011434 ORTHO05D013585 2.4e-29 132.1 99 68.7
Thecc.02G027500 Theobroma cacao HOM05D011434 ORTHO05D013585 2.4e-29 132.1 99 68.7
Gorai.005G264300 Gossypium raimondii HOM05D011434 ORTHO05D013585 1.1e-21 106.7 100 53.0
Gorai.005G264200 Gossypium raimondii HOM05D011434 ORTHO05D013585 3.5e-20 101.7 95 53.7
Gohir.A03G214780 Gossypium hirsutum HOM05D011434 ORTHO05D013585 5.9e-20 100.9 101 51.5
Gohir.D02G236100 Gossypium hirsutum HOM05D011434 ORTHO05D013585 6.6e-19 97.4 100 48.0
Gohir.D02G236200 Gossypium hirsutum HOM05D011434 ORTHO05D013585 1.9e-18 95.9 100 49.0
Gohir.A03G214732 Gossypium hirsutum HOM05D011434 ORTHO05D013585 1.4e-16 89.7 100 47.0
COL.COLO4_17765 Corchorus olitorius HOM05D011434 ORTHO05D013585 2.0e-15 85.9 98 41.8
Gohir.A03G214600 Gossypium hirsutum HOM05D011434 ORTHO05D013585 1.7e-14 82.8 100 45.0
COL.COLO4_17766 Corchorus olitorius HOM05D011434 ORTHO05D013585 1.3e-11 73.2 101 46.5
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.0e-08 61.6 103 33.0
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 8.9e-08 60.5 103 32.0
Gorai.012G151200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-06 56.6 106 34.9
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-06 56.2 76 36.8
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-06 55.8 100 32.0
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.9e-06 55.5 103 31.1


User provided reference genes

Program Settings