Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G027000 Theobroma cacao HOM05D011434 ORTHO05D013585 8.2e-54 213.4 102 100.0
Thecc.02G026700 Theobroma cacao HOM05D011434 ORTHO05D013585 3.8e-51 204.5 102 96.1
Thecc.02G027300 Theobroma cacao HOM05D011434 ORTHO05D013585 5.5e-50 200.7 102 95.1
Thecc.02G027700 Theobroma cacao HOM05D011434 ORTHO05D013585 6.7e-48 193.7 102 90.2
Thecc.02G027100 Theobroma cacao HOM05D011434 ORTHO05D013585 2.9e-35 151.8 100 73.0
Thecc.02G027400 Theobroma cacao HOM05D011434 ORTHO05D013585 2.9e-35 151.8 100 73.0
Thecc.02G027200 Theobroma cacao HOM05D011434 ORTHO05D013585 1.5e-31 139.4 99 71.7
Thecc.02G027500 Theobroma cacao HOM05D011434 ORTHO05D013585 1.5e-31 139.4 99 71.7
Gorai.005G264300 Gossypium raimondii HOM05D011434 ORTHO05D013585 1.8e-21 105.9 100 55.0
Gohir.A03G214780 Gossypium hirsutum HOM05D011434 ORTHO05D013585 2.0e-20 102.4 101 53.5
Gorai.005G264200 Gossypium raimondii HOM05D011434 ORTHO05D013585 1.3e-19 99.8 97 53.6
Gohir.D02G236100 Gossypium hirsutum HOM05D011434 ORTHO05D013585 1.7e-19 99.4 100 51.0
Gohir.D02G236200 Gossypium hirsutum HOM05D011434 ORTHO05D013585 2.9e-19 98.6 100 53.0
Gohir.A03G214732 Gossypium hirsutum HOM05D011434 ORTHO05D013585 8.0e-17 90.5 100 50.0
COL.COLO4_17765 Corchorus olitorius HOM05D011434 ORTHO05D013585 1.3e-14 83.2 98 41.8
Gohir.A03G214600 Gossypium hirsutum HOM05D011434 ORTHO05D013585 9.2e-13 77.0 100 45.0
COL.COLO4_17766 Corchorus olitorius HOM05D011434 ORTHO05D013585 4.6e-12 74.7 101 45.5
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-07 59.3 77 39.0
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.4e-07 58.2 103 32.0
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.8e-07 57.0 76 36.8


User provided reference genes

Program Settings