Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G021900 Theobroma cacao HOM05D003925 ORTHO05D409199 2.7e-71 271.9 143 100.0
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 1.5e-08 63.5 34 91.2
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 8.1e-07 57.8 70 48.6
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.4e-06 57.0 42 66.7
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 2.4e-06 56.2 48 60.4
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 3.1e-06 55.8 38 65.8
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 3.1e-06 55.8 48 60.4
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 3.1e-06 55.8 38 71.1
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 3.1e-06 55.8 38 68.4
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.1e-06 55.8 38 71.1
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 3.1e-06 55.8 38 71.1
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.0e-06 55.5 38 68.4
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 5.2e-06 55.1 38 65.8
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 5.2e-06 55.1 43 62.8
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 5.2e-06 55.1 43 62.8
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 5.2e-06 55.1 41 61.0
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 6.8e-06 54.7 38 68.4
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 6.8e-06 54.7 38 68.4
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 6.8e-06 54.7 38 68.4
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 6.8e-06 54.7 38 68.4
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 6.8e-06 54.7 38 65.8
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 65.8
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 8.9e-06 54.3 47 59.6
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 68.4
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 8.9e-06 54.3 38 71.1


User provided reference genes

Program Settings