Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G021100 Theobroma cacao HOM05D003925 ORTHO05D004832 2.0e-65 252.3 125 100.0
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 3.2e-07 58.9 44 75.0
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 4.1e-07 58.5 44 75.0
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 4.1e-07 58.5 44 75.0
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 4.1e-07 58.5 44 75.0
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 5.4e-07 58.2 44 75.0
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 5.4e-07 58.2 44 75.0
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 5.4e-07 58.2 44 75.0
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 5.4e-07 58.2 44 75.0
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 7.1e-07 57.8 44 72.7
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 7.1e-07 57.8 44 75.0
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 70.5
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 72.7
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 72.7
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 72.7
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 72.7
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 75.0
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 9.2e-07 57.4 44 72.7
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 1.2e-06 57.0 44 70.5
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 1.2e-06 57.0 44 72.7
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.6e-06 56.6 44 75.0
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 1.6e-06 56.6 42 76.2
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 1.6e-06 56.6 44 72.7
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 1.6e-06 56.6 44 72.7
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 1.6e-06 56.6 44 70.5
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 1.6e-06 56.6 44 72.7
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.1e-06 56.2 44 72.7
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.7e-06 55.8 37 86.5
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 3.5e-06 55.5 44 70.5
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 3.5e-06 55.5 44 70.5
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 3.5e-06 55.5 44 70.5
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 4.6e-06 55.1 41 75.6
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 6.0e-06 54.7 44 68.2
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 7.8e-06 54.3 36 83.3
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 7.8e-06 54.3 36 83.3


User provided reference genes

Program Settings