Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G013500 Theobroma cacao HOM05D000101 ORTHO05D410192 6.2e-35 150.2 74 100.0
Thecc.02G013100 Theobroma cacao HOM05D000101 ORTHO05D003282 7.1e-31 136.7 73 90.4
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 1.4e-26 122.5 73 80.8
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 3.0e-21 104.8 73 71.2
Thecc.03G111300 Theobroma cacao HOM05D000101 ORTHO05D003282 3.0e-21 104.8 73 71.2
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 4.3e-20 100.9 73 68.5
Duzib205G1449 Durio zibethinus HOM05D000101 ORTHO05D003282 5.6e-20 100.5 73 67.1
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 6.9e-18 93.6 73 63.0
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 6.9e-18 93.6 73 63.0
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 2.9e-16 88.2 73 60.3
Lj4g0017827 Lotus japonicus HOM05D000101 ORTHO05D003282 6.9e-10 67.0 73 42.5
Glyma.05G165600 Glycine max HOM05D000101 ORTHO05D003282 5.8e-09 63.9 73 45.2
VMungo0251G1948 Vigna mungo HOM05D000101 ORTHO05D003282 5.8e-09 63.9 73 45.2
Cfa026040 Carpinus fangiana HOM05D000101 ORTHO05D003282 1.7e-08 62.4 73 41.1
QL02p102345 Quercus lobata HOM05D000101 ORTHO05D003282 1.7e-08 62.4 73 43.8
GSVIVG01023210001 Vitis vinifera HOM05D000101 ORTHO05D003282 2.2e-08 62.0 70 45.7
Cfa026050 Carpinus fangiana HOM05D000101 ORTHO05D003282 2.9e-08 61.6 73 39.7
Glyma.08G123300 Glycine max HOM05D000101 ORTHO05D003282 3.8e-08 61.2 73 43.8
QL02p102988 Quercus lobata HOM05D000101 ORTHO05D003282 3.8e-08 61.2 73 43.8
GSVIVG01023207001 Vitis vinifera HOM05D000101 ORTHO05D003282 3.8e-08 61.2 70 41.4
QL02p102261 Quercus lobata HOM05D000101 ORTHO05D003282 4.9e-08 60.8 73 42.5
Haze_10012 Corylus avellana HOM05D000101 ORTHO05D003282 6.5e-08 60.5 73 41.1
QL02p102904 Quercus lobata HOM05D000101 ORTHO05D003282 6.5e-08 60.5 73 42.5
vmacro01689 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 8.4e-08 60.1 71 38.0
arahy.Tifrunner.gnm1.ann1.8BMB32 Arachis hypogaea HOM05D000101 ORTHO05D003282 1.4e-07 59.3 73 39.7
arahy.Tifrunner.gnm1.ann1.L44J93 Arachis hypogaea HOM05D000101 ORTHO05D003282 1.4e-07 59.3 73 39.7
arahy.Tifrunner.gnm1.ann1.EZ6YKV Arachis hypogaea HOM05D000101 ORTHO05D003282 1.9e-07 58.9 73 39.7
Dinv29663 Davidia involucrata HOM05D000101 ORTHO05D003282 1.9e-07 58.9 71 38.0
PGR042G3275 Punica granatum HOM05D000101 ORTHO05D003282 1.9e-07 58.9 71 39.4
Thecc.02G013300 Theobroma cacao HOM05D000101 ORTHO05D003282 1.9e-07 58.9 32 84.4
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 2.5e-07 58.5 71 36.6
Actinidia38982 Actinidia chinensis HOM05D000101 ORTHO05D003282 5.5e-07 57.4 71 39.4
Eucgr.G00248 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.2e-06 56.2 71 39.4
RhsimUnG0032000 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.2e-06 56.2 71 39.4
Rhsim11G0118800 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.6e-06 55.8 71 36.6
MBI12_g17628_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D003282 2.1e-06 55.5 72 37.5
Eucgr.G00249 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.7e-06 55.1 71 38.0
Eucgr.J02649 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.7e-06 55.1 71 38.0
Rhsim11G0119600 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.5e-06 54.7 70 35.7
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 3.5e-06 54.7 71 38.0
Actinidia26187 Actinidia chinensis HOM05D000101 ORTHO05D003282 4.6e-06 54.3 71 36.6
QL02p102834 Quercus lobata HOM05D000101 ORTHO05D003282 4.6e-06 54.3 73 38.4
RhsimUnG0201900 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.0e-06 53.9 64 39.1
Rhsim11G0120300 Rhododendron simsii HOM05D000101 ORTHO05D003282 7.9e-06 53.5 71 35.2


User provided reference genes

Program Settings