Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 1.1e-70 270.0 149 100.0
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.1e-38 163.7 148 60.8
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 3.2e-38 162.2 148 60.1
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 9.2e-38 160.6 139 67.6
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 9.2e-38 160.6 148 60.1
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 1.5e-35 153.3 147 63.3
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 7.8e-29 131.0 124 57.3
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 1.6e-26 123.2 124 53.2
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 6.2e-26 121.3 120 54.2
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 8.1e-26 120.9 131 58.8
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 2.0e-24 116.3 127 51.2
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 5.8e-24 114.8 132 61.4
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 5.8e-24 114.8 129 63.6
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 5.8e-24 114.8 124 55.6
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 7.6e-24 114.4 141 44.7
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 1.3e-23 113.6 124 54.8
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 2.4e-22 109.4 121 50.4
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.4e-22 109.4 129 55.0
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 9.3e-22 107.5 130 60.0
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 2.1e-21 106.3 136 44.9
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 3.5e-21 105.5 143 44.8
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 4.6e-21 105.1 121 63.6
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 6.0e-21 104.8 121 62.8
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 1.7e-20 103.2 133 48.1
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 3.9e-20 102.1 138 48.6
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 4.3e-19 98.6 82 63.4
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 4.3e-19 98.6 73 64.4
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 4.3e-19 98.6 126 46.0
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.6e-18 96.7 129 45.7
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 1.6e-18 96.7 127 44.1
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 3.6e-18 95.5 72 66.7
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 8.1e-18 94.4 126 46.0
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 1.1e-17 94.0 130 47.7
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 1.8e-17 93.2 134 45.5
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 3.1e-17 92.4 97 53.6
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 5.3e-17 91.7 85 55.3
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 1.5e-16 90.1 117 47.9
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 4.5e-16 88.6 94 54.3
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 7.6e-16 87.8 97 52.6
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 7.6e-16 87.8 74 60.8
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 9.9e-16 87.4 69 60.9
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 9.9e-16 87.4 82 54.9
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 2.9e-15 85.9 98 51.0
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 2.9e-15 85.9 98 51.0
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 2.9e-15 85.9 94 51.1
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 8.4e-15 84.3 85 51.8
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 1.1e-14 84.0 86 55.8
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 1.4e-14 83.6 75 54.7
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 1.4e-14 83.6 76 56.6
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 1.9e-14 83.2 81 55.6
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 2.4e-14 82.8 97 49.5
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 2.4e-14 82.8 83 55.4
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 7.1e-14 81.3 61 63.9
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 7.1e-14 81.3 64 67.2
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 9.3e-14 80.9 84 54.8
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 1.2e-13 80.5 67 62.7
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 2.1e-13 79.7 68 60.3
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 2.1e-13 79.7 68 60.3
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 3.5e-13 79.0 97 47.4
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 3.5e-13 79.0 97 47.4
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 7.9e-13 77.8 77 54.5
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 1.8e-12 76.6 67 59.7
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 1.6e-10 70.1 73 56.2
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 5.3e-09 65.1 124 44.4
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 1.3e-07 60.5 75 42.7
Os06g0666800 Oryza sativa ssp. japonica HOM05D019633 ORTHO05D010220 3.8e-07 58.9 73 45.2
ATR0752G237 Amborella trichopoda HOM05D019633 ORTHO05D010220 7.1e-06 54.7 67 50.7
Cpa.g.sc30.141 Carica papaya HOM05D008198 ORTHO05D010220 7.1e-06 54.7 88 42.0


User provided reference genes

Program Settings