Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.6e-62 242.7 126 100.0
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.7e-48 196.1 125 80.8
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 9.2e-47 190.3 125 76.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 4.6e-46 188.0 126 76.2
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 1.1e-44 183.3 125 74.4
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.5e-44 183.0 126 73.0
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.3e-44 181.4 126 71.4
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 7.3e-44 180.6 127 71.7
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.2e-43 179.9 128 73.4
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.2e-43 179.9 126 73.8
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.2e-43 179.9 126 73.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.6e-43 179.5 126 69.8
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 2.1e-43 179.1 126 73.0
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 6.2e-43 177.6 126 71.4
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 8.1e-43 177.2 126 72.2
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.1e-42 176.8 126 73.8
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 5.2e-42 174.5 126 70.6
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 6.8e-42 174.1 126 70.6
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 8.9e-42 173.7 126 71.4
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.2e-41 173.3 125 68.0
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.5e-41 172.9 127 68.5
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.5e-41 172.9 126 72.2
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.0e-41 172.6 126 67.5
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 3.4e-41 171.8 126 67.5
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 5.8e-41 171.0 126 69.8
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 2.2e-40 169.1 126 67.5
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 6.4e-40 167.5 126 69.8
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 8.3e-40 167.2 126 69.0
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.1e-39 166.8 127 69.3
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.4e-39 166.4 127 68.5
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.9e-39 166.0 124 67.7
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.9e-39 166.0 126 66.7
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 2.4e-39 165.6 126 66.7
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.2e-39 165.2 126 68.3
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 3.2e-39 165.2 126 68.3
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 3.2e-39 165.2 127 67.7
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 3.2e-39 165.2 127 68.5
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.2e-39 165.2 126 66.7
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 4.1e-39 164.9 126 65.9
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 7.1e-39 164.1 127 66.9
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 7.1e-39 164.1 127 66.9
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.2e-38 163.3 126 65.9
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 1.2e-38 163.3 126 65.9
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.2e-38 163.3 126 66.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.2e-38 163.3 126 68.3
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.2e-38 163.3 125 65.6
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.7e-38 162.2 126 64.3
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.7e-38 162.2 126 64.3
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 3.5e-38 161.8 126 65.9
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 4.6e-38 161.4 126 64.3
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 6.0e-38 161.0 127 64.6
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 6.0e-38 161.0 127 64.6
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 6.0e-38 161.0 126 64.3
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 7.8e-38 160.6 125 64.8
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 7.8e-38 160.6 126 65.9
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 7.8e-38 160.6 126 63.5
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 7.8e-38 160.6 126 65.1
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.0e-37 160.2 127 63.8
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.0e-37 160.2 126 64.3
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 1.3e-37 159.8 125 63.2
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-37 159.8 127 63.8
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.7e-37 159.5 127 63.8
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 2.3e-37 159.1 126 63.5
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 2.3e-37 159.1 126 65.1
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.0e-37 158.7 116 70.7
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 3.9e-37 158.3 125 63.2
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 5.1e-37 157.9 125 63.2
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 6.6e-37 157.5 127 64.6
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.6e-37 157.1 126 64.3
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 8.6e-37 157.1 127 65.4
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.1e-36 156.8 126 64.3
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 2.5e-36 155.6 126 62.7
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 3.3e-36 155.2 126 63.5
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 4.3e-36 154.8 126 61.9
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 9.5e-36 153.7 126 61.1
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 9.5e-36 153.7 126 61.9
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.2e-35 153.3 126 58.7
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 1.2e-35 153.3 126 61.1
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 2.1e-35 152.5 126 61.9
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.1e-35 152.5 126 61.9
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 2.1e-35 152.5 126 61.9
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.8e-35 152.1 126 62.7
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 6.2e-35 151.0 126 61.1
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 6.2e-35 151.0 126 61.1
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 6.2e-35 151.0 126 61.1
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 6.2e-35 151.0 126 61.1
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 6.2e-35 151.0 126 61.1
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-34 150.2 124 58.1
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-34 150.2 124 58.1
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.8e-34 149.4 126 61.1
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 2.3e-34 149.1 123 59.3
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 3.1e-34 148.7 125 60.0
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 4.0e-34 148.3 126 59.5
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 4.0e-34 148.3 126 59.5
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 4.0e-34 148.3 126 59.5
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 5.2e-34 147.9 126 59.5
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 5.2e-34 147.9 126 58.7
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 6.8e-34 147.5 127 61.4
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 8.9e-34 147.1 126 58.7
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.2e-33 146.7 126 59.5
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 2.0e-33 146.0 126 58.7
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 2.0e-33 146.0 127 58.3
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 3.4e-33 145.2 126 60.3
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 5.8e-33 144.4 126 58.7
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.1e-31 140.2 126 57.1
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.5e-30 135.2 126 57.9
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-30 134.8 122 59.8
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-29 132.9 128 57.8
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 3.9e-29 131.7 129 55.8
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 5.1e-29 131.3 128 57.0
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 8.6e-29 130.6 128 57.0
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-28 129.8 128 57.0
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.5e-28 129.8 128 57.0
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.5e-28 129.8 126 55.6
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.9e-28 129.4 128 55.5
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-27 126.7 128 54.7
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-27 126.7 128 54.7
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-27 126.7 128 54.7
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.2e-27 126.7 128 54.7
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.2e-27 126.7 128 54.7
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.6e-27 126.3 126 55.6
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 6.2e-27 124.4 126 53.2
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.8e-26 122.9 126 53.2
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 4.0e-26 121.7 128 52.3
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.9e-24 115.5 128 50.0
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 6.4e-24 114.4 91 63.7
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.4e-24 114.0 126 52.4
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 9.3e-23 110.5 115 53.9
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-22 109.0 129 51.9
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 2.7e-22 109.0 129 51.9
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 4.6e-22 108.2 123 48.0
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 7.8e-22 107.5 123 48.0
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.3e-21 106.7 89 59.6
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 3.0e-21 105.5 123 47.2
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.0e-13 80.5 59 67.8
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.0e-13 80.5 66 62.1
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.1e-13 78.2 125 42.4
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 5.5e-07 58.2 125 32.8
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 2.1e-06 56.2 71 46.5
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 3.5e-06 55.5 53 50.9


User provided reference genes

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