Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 6.1e-64 247.3 121 100.0
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 8.9e-31 137.1 123 66.7
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 2.3e-18 95.9 130 53.1
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 2.6e-14 82.4 80 50.0
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 7.5e-14 80.9 125 41.6
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 9.8e-14 80.5 60 63.3
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 5.4e-12 74.7 114 42.1
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 5.4e-12 74.7 125 40.8
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 5.4e-12 74.7 87 49.4
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 7.1e-12 74.3 91 47.3
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 2.7e-11 72.4 91 46.2
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 3.5e-11 72.0 122 36.9
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 7.8e-11 70.9 124 40.3
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 1.0e-10 70.5 117 38.5
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.0e-10 70.5 108 43.5
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.7e-10 69.7 107 43.0
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 2.3e-10 69.3 78 48.7
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 5.1e-10 68.2 107 41.1
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 5.1e-10 68.2 107 41.1
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 5.1e-10 68.2 107 42.1
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 6.6e-10 67.8 116 37.1
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 6.6e-10 67.8 67 52.2
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 1.9e-09 66.2 79 49.4
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 3.3e-09 65.5 122 42.6
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 5.6e-09 64.7 90 36.7
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 5.6e-09 64.7 122 36.9
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 7.3e-09 64.3 57 59.6
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 1.2e-08 63.5 95 42.1
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 1.2e-08 63.5 95 42.1
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 2.1e-08 62.8 56 58.9
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 3.6e-08 62.0 100 37.0
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 3.6e-08 62.0 100 37.0
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 6.2e-08 61.2 85 45.9
HanXRQChr15g0480651 Helianthus annuus HOM05D008423 ORTHO05D010599 1.1e-07 60.5 112 42.0
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 1.4e-07 60.1 119 37.8
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 2.3e-07 59.3 89 37.1
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 3.1e-07 58.9 55 49.1
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 3.1e-07 58.9 77 45.5
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 6.8e-07 57.8 80 46.2
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 2.0e-06 56.2 81 44.4
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 2.0e-06 56.2 107 32.7
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 2.6e-06 55.8 37 73.0
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 4.4e-06 55.1 48 50.0
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 4.4e-06 55.1 51 52.9
Aqoxy148s005 Aquilegia oxysepala HOM05D008423 ORTHO05D010599 7.6e-06 54.3 117 35.9


User provided reference genes

Program Settings