Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 3.9e-76 288.1 151 100.0
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.8e-52 209.5 137 84.7
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.0e-52 208.8 137 82.5
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 3.0e-52 208.8 137 82.5
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.6e-50 203.0 122 87.7
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.4e-49 199.1 127 84.3
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 4.9e-47 191.4 121 86.8
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.9e-46 189.5 125 82.4
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 7.1e-46 187.6 125 80.8
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 7.1e-46 187.6 127 81.1
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.6e-45 184.9 133 76.7
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 6.0e-45 184.5 125 81.6
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 7.9e-45 184.1 135 77.8
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.3e-44 183.3 124 81.5
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.3e-44 182.6 139 70.5
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 3.9e-44 181.8 117 84.6
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 5.1e-44 181.4 117 83.8
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 5.1e-44 181.4 117 83.8
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 8.7e-44 180.6 125 79.2
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 8.7e-44 180.6 122 82.0
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 3.3e-43 178.7 127 77.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 3.3e-43 178.7 116 85.3
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 4.3e-43 178.3 123 78.9
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 4.3e-43 178.3 117 82.1
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 5.7e-43 177.9 113 83.2
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 5.7e-43 177.9 120 82.5
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 5.7e-43 177.9 121 79.3
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 7.4e-43 177.6 120 82.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.3e-42 176.8 116 83.6
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.6e-42 176.4 121 81.8
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.1e-42 176.0 115 82.6
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 2.8e-42 175.6 125 79.2
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 8.2e-42 174.1 120 80.8
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 8.2e-42 174.1 116 80.2
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.1e-41 173.7 133 72.9
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 1.1e-41 173.7 130 75.4
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.4e-41 173.3 123 76.4
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.8e-41 172.9 115 81.7
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 2.4e-41 172.6 109 87.2
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.4e-41 172.6 115 80.0
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 4.1e-41 171.8 127 72.4
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 4.1e-41 171.8 118 79.7
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 5.3e-41 171.4 133 73.7
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 5.3e-41 171.4 120 80.0
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.3e-41 171.4 131 74.8
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 5.3e-41 171.4 118 78.8
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 6.9e-41 171.0 118 77.1
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.2e-40 170.2 118 79.7
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.2e-40 170.2 129 75.2
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.2e-40 170.2 131 74.8
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.4e-40 168.7 127 74.0
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.4e-40 168.7 114 79.8
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 4.5e-40 168.3 120 77.5
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 7.6e-40 167.5 113 79.6
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 1.3e-39 166.8 129 71.3
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.3e-39 166.8 119 75.6
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 1.3e-39 166.8 129 71.3
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 1.3e-39 166.8 129 71.3
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.3e-39 166.8 119 75.6
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 2.9e-39 165.6 131 71.0
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.8e-39 165.2 113 78.8
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.8e-39 165.2 138 67.4
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.8e-39 165.2 138 67.4
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.5e-39 164.5 117 74.4
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 6.5e-39 164.5 130 70.8
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 6.5e-39 164.5 144 67.4
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 6.5e-39 164.5 144 68.8
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.4e-38 163.3 120 73.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.4e-38 163.3 114 75.4
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.9e-38 162.9 124 68.5
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.9e-38 162.9 124 68.5
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 2.5e-38 162.5 139 64.7
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 3.2e-38 162.2 123 71.5
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 7.2e-38 161.0 119 72.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 7.2e-38 161.0 111 75.7
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 9.3e-38 160.6 121 70.2
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.2e-37 160.2 97 87.6
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.2e-37 160.2 97 87.6
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.2e-37 160.2 127 72.4
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 1.6e-37 159.8 165 59.4
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 2.7e-37 159.1 111 79.3
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 3.6e-37 158.7 120 72.5
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 7.9e-37 157.5 126 66.7
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 1.3e-36 156.8 131 67.2
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.3e-36 156.8 130 65.4
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 5.7e-35 151.4 128 71.1
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 4.1e-33 145.2 109 70.6
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 5.3e-33 144.8 124 62.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.3e-31 140.2 119 62.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.3e-31 140.2 133 62.4
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 9.4e-30 134.0 131 58.0
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.2e-29 133.7 122 67.2
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 1.6e-29 133.3 117 62.4
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 3.6e-29 132.1 97 71.1
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 6.1e-29 131.3 138 56.5
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.7e-26 123.2 107 64.5
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 5.3e-25 118.2 97 68.0
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 4.5e-24 115.2 104 63.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.7e-24 114.4 119 56.3
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.2e-22 108.6 100 62.0
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 8.8e-20 100.9 73 71.2
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.1e-17 94.0 95 61.1
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.1e-17 92.4 114 43.9
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-17 91.3 116 41.4
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 7.0e-17 91.3 110 46.4
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.2e-16 90.5 59 76.3
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 2.1e-13 79.7 52 82.7
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 9.1e-09 64.3 49 65.3
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 7.7e-08 61.2 51 62.7
SMO290G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.5e-06 56.2 113 35.4


User provided reference genes

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