Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 0.0e+00 1082.0 565 100.0
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 5.4e-256 887.5 568 85.0
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 9.0e-235 817.0 569 77.7
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 5.3e-211 738.0 567 72.7
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 4.5e-210 734.9 567 72.5
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 1.5e-149 533.9 587 56.4
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 3.4e-149 532.7 587 56.6
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 2.4e-147 526.6 567 56.3
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 4.6e-146 522.3 597 54.9
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 2.5e-144 516.5 590 52.4
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.4e-139 500.7 586 54.6
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 2.4e-139 500.0 602 50.0
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 6.0e-138 495.4 590 53.6
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 3.0e-137 493.0 570 54.6
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 2.0e-133 480.3 588 50.2
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 9.9e-133 478.0 574 50.3
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.3e-131 471.5 582 52.1
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 1.6e-130 470.7 582 51.2
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 7.8e-130 468.4 558 50.9
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 7.8e-130 468.4 584 50.5
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.3e-129 466.8 594 48.8
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 5.1e-129 465.7 570 50.2
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 1.1e-128 464.5 697 44.6
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 2.5e-128 463.4 602 49.3
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 7.3e-128 461.8 562 49.3
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 2.4e-126 456.8 580 49.5
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 3.1e-126 456.4 578 50.2
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 3.8e-124 449.5 580 48.8
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 7.1e-123 445.3 570 47.4
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 9.3e-123 444.9 586 49.1
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 4.6e-122 442.6 580 48.6
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 7.9e-122 441.8 569 49.0
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 3.9e-121 439.5 535 50.5
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 6.7e-121 438.7 591 46.2
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 1.1e-120 438.0 425 63.8
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 2.5e-120 436.8 579 47.8
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 4.3e-120 436.0 577 47.5
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 5.6e-120 435.6 574 49.3
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 5.6e-120 435.6 590 46.6
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 2.8e-119 433.3 588 47.4
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 8.1e-119 431.8 582 47.3
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 1.2e-117 427.9 583 46.8
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 2.2e-116 423.7 642 43.9
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 3.8e-116 422.9 552 47.8
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 1.6e-114 417.5 569 46.9
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 7.9e-114 415.2 587 45.5
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 3.0e-113 413.3 610 43.6
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 3.9e-113 412.9 603 45.3
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 1.1e-112 411.4 592 45.8
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 4.3e-112 409.5 573 45.2
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 2.1e-111 407.1 582 45.7
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 6.2e-111 405.6 598 44.3
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.2e-111 405.6 598 44.3
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.4e-110 404.4 599 45.2
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.8e-110 404.1 598 44.1
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 5.3e-110 402.5 570 43.9
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 1.3e-108 397.9 604 43.0
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 1.7e-108 397.5 556 47.3
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.1e-106 390.6 598 43.3
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 2.7e-106 390.2 606 42.9
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 1.5e-104 384.4 572 46.3
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.7e-104 381.7 542 47.6
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 1.3e-103 381.3 569 44.5
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 1.4e-102 377.9 569 45.2
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 2.4e-102 377.1 636 41.0
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 2.6e-101 373.6 593 43.5
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 5.9e-101 372.5 635 41.7
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 2.9e-100 370.2 567 43.2
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 1.4e-99 367.9 587 42.6
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 9.3e-99 365.2 535 45.6
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 4.6e-98 362.8 565 41.9
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 6.7e-97 359.0 564 41.0
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 1.1e-96 358.2 564 41.3
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 1.1e-96 358.2 566 41.0
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.1e-94 351.7 593 43.2
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 1.4e-94 351.3 516 43.0
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 1.8e-94 350.9 568 41.9
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 1.8e-94 350.9 568 41.2
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 3.1e-94 350.1 564 41.0
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 6.9e-94 349.0 563 40.7
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 2.6e-93 347.1 564 41.3
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 3.4e-93 346.7 565 40.2
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 4.5e-93 346.3 480 48.8
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 7.7e-93 345.5 571 40.5
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 7.7e-93 345.5 564 40.8
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 8.5e-92 342.0 522 44.3
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 2.5e-91 340.5 567 40.7
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 2.5e-91 340.5 567 40.7
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 2.5e-91 340.5 567 40.7
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.5e-91 340.5 598 40.1
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 2.1e-90 337.4 566 40.6
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 2.1e-90 337.4 512 43.9
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 4.7e-90 336.3 567 40.7
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 1.4e-89 334.7 568 41.2
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 1.4e-89 334.7 596 38.6
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 3.3e-88 330.1 512 43.0
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.7e-87 327.8 541 43.6
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 6.3e-87 325.9 561 41.2
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 8.2e-87 325.5 563 40.5
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 1.1e-86 325.1 368 53.3
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 2.7e-82 310.5 574 38.3
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 5.2e-81 306.2 485 44.5
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 1.1e-80 305.1 606 38.4
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 1.1e-78 298.5 586 37.9
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 2.0e-77 294.3 566 38.2
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.7e-76 291.2 327 53.2
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.7e-71 273.5 486 39.1
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 8.2e-71 272.3 583 36.5
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 1.1e-70 271.9 493 40.2
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 1.2e-69 268.5 227 65.6
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 1.6e-69 268.1 487 39.8
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 3.2e-67 260.4 590 33.7
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 7.2e-67 259.2 595 33.4
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 2.1e-66 257.7 580 37.4
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 6.3e-63 246.1 485 39.2
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.8e-62 244.6 498 40.8
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 7.5e-56 222.6 261 52.9
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 4.1e-54 216.9 261 51.7
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.4e-54 216.5 261 51.7
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.7e-52 211.5 415 38.3
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 9.5e-51 205.7 261 50.2
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.6e-50 204.9 560 32.1
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 8.9e-49 199.1 283 43.5
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 9.2e-46 189.1 463 37.4
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 2.5e-43 181.0 634 29.3
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 6.2e-42 176.4 311 35.4
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 4.9e-39 166.8 538 30.9
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 1.9e-38 164.9 328 40.2
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 7.0e-38 162.9 356 40.2
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.6e-37 161.8 117 68.4
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 6.2e-34 149.8 164 51.2
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 4.4e-32 143.7 401 32.2
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.3e-31 142.1 168 47.6
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 2.9e-31 141.0 123 53.7
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-30 139.0 264 40.5
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 5.4e-30 136.7 101 69.3
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 5.4e-30 136.7 320 35.6
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 9.2e-30 136.0 117 59.8
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 7.3e-27 126.3 393 31.3
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 1.1e-25 122.5 289 26.6
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 1.2e-21 109.0 100 53.0
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.2e-21 109.0 166 41.0
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 4.0e-17 94.0 159 39.6
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 1.5e-16 92.0 130 44.6
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 5.8e-16 90.1 289 25.6
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 2.2e-15 88.2 99 50.5
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 7.1e-14 83.2 123 47.2


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