Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G320800 Theobroma cacao HOM05D008325 ORTHO05D010336 2.7e-48 195.3 117 100.0
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 4.0e-36 154.8 120 70.0
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 2.2e-34 149.1 118 72.9
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 2.0e-27 125.9 124 59.7
Duzib211G0526 Durio zibethinus HOM05D008325 ORTHO05D010336 2.6e-27 125.6 119 63.9
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.9e-22 109.4 124 51.6
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 7.3e-22 107.5 119 56.3
Gohir.A08G039900 Gossypium hirsutum HOM05D008325 ORTHO05D010336 4.7e-21 104.8 119 54.6
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 1.1e-20 103.6 110 53.6
Gohir.D08G050000 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.4e-20 103.2 119 54.6
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 2.3e-20 102.4 123 51.2
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 2.3e-20 102.4 123 51.2
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 5.2e-20 101.3 107 53.3
Gorai.007G120300 Gossypium raimondii HOM05D008325 ORTHO05D010336 2.0e-19 99.4 121 65.3
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 2.9e-18 95.5 119 51.3
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 1.4e-17 93.2 122 49.2
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 1.9e-17 92.8 109 52.3
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 5.4e-17 91.3 109 52.3
Gohir.A11G107100 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.5e-16 88.6 119 62.2
Manes.05G011600 Manihot esculenta HOM05D008325 ORTHO05D010336 1.7e-15 86.3 122 56.6
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 1.1e-14 83.6 98 51.0
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 1.5e-14 83.2 100 47.0
Ciclev10022863m.g Citrus clementina HOM05D008325 ORTHO05D010336 2.5e-14 82.4 134 41.0
Gohir.D11G112050 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.3e-14 82.0 121 59.5
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 9.5e-14 80.5 126 38.9
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 2.8e-13 79.0 114 43.0
Nn3g21852 Nelumbo nucifera HOM05D008325 ORTHO05D010336 8.1e-13 77.4 107 43.9
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 1.1e-12 77.0 103 49.5
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.4e-12 76.6 101 45.5
Oeu038060.1 Olea europaea HOM05D008325 ORTHO05D010336 5.2e-12 74.7 126 37.3
VMungo1383G3369 Vigna mungo HOM05D008325 ORTHO05D010336 1.3e-10 70.1 117 52.1
Actinidia21366 Actinidia chinensis HOM05D008325 ORTHO05D010336 2.9e-10 68.9 92 47.8
Glyma.02G009500 Glycine max HOM05D008325 ORTHO05D010336 6.4e-10 67.8 128 35.9
Cpa.g.sc1096.2 Carica papaya HOM05D008325 ORTHO05D010336 1.9e-09 66.2 77 49.4
Phvul.001G215800 Phaseolus vulgaris HOM05D008325 ORTHO05D010336 4.1e-09 65.1 84 58.3
TAR633G0021 Trochodendron aralioides HOM05D008325 ORTHO05D010336 4.6e-08 61.6 67 52.2
ClCG09G004800 Citrullus lanatus HOM05D023270 ORTHO05D010336 1.0e-07 60.5 118 37.3
Actinidia37695 Actinidia chinensis HOM05D008325 ORTHO05D010336 3.0e-07 58.9 104 46.2
Lj5g0017973 Lotus japonicus HOM05D008325 ORTHO05D010336 3.0e-07 58.9 126 33.3
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 3.0e-07 58.9 112 32.1
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 6.6e-07 57.8 122 34.4
CSS0037105 Camellia sinensis var. sinensis HOM05D008325 ORTHO05D010336 1.1e-06 57.0 118 32.2
Nn4g25441 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.1e-06 57.0 116 35.3
Glyma.19G219600 Glycine max HOM05D008325 ORTHO05D010336 1.9e-06 56.2 120 34.2
Sed0013744 Sechium edule HOM05D023270 ORTHO05D010336 3.3e-06 55.5 108 44.4
Sed0014576 Sechium edule HOM05D023270 ORTHO05D010336 3.3e-06 55.5 103 35.9
Hma1.2p1_0965F.1_g242220 Hydrangea macrophylla HOM05D008325 ORTHO05D010336 4.3e-06 55.1 140 32.1
Oeu009100.1 Olea europaea HOM05D007843 ORTHO05D003639 4.3e-06 55.1 112 30.4
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 4.3e-06 55.1 112 33.9


User provided reference genes

Program Settings